Top cofit genes for mRNA_607 from Rhodosporidium toruloides IFO0880

mRNA_607 8975 : K00140 mmsA, iolA, ALDH6A1 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_8163 16531 HMMPfam-Domain of unknown function (DUF4505)-PF14956 no 0.78
2 mRNA_4793 13161 HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113 no 0.76
3 mRNA_216 8584 BLAST protein of choline transporter-like family [Rhodo... no 0.74
4 mRNA_7527 15895 K20031 ZDHHC6 palmitoyltransferase ZDHHC6 no 0.74
5 mRNA_2191 10559 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048 no 0.74
6 mRNA_7137 15505 KOG1933 Cholesterol transport protein (Niemann-Pick C disease protein) no 0.73
7 mRNA_6833 15201 HMMPfam-Outer mitochondrial membrane transport complex protein-PF10568,HMMPfam-Tom37 C-terminal domain-PF11801 no 0.72
8 mRNA_5031 13399 HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785 no 0.72
9 mRNA_4097 12465 KOG1339 Aspartyl protease no 0.72
10 mRNA_7159 15527 HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 no 0.72
11 mRNA_7404 15772 HMMPfam-Protein of unknown function (DUF2470)-PF10615 no 0.71
12 mRNA_83 8451 Hypothetical Protein no 0.71
13 mRNA_4703 13071 Hypothetical Protein no 0.71
14 mRNA_1971 10339 K02429 fucP MFS transporter, FHS family, L-fucose permease no 0.70
15 mRNA_4587 12955 HMMPfam-Complex1_LYR-like-PF13232 no 0.70
16 mRNA_1094 9462 HMMPfam-Frag1/DRAM/Sfk1 family-PF10277 no 0.70
17 mRNA_6103 14471 K08762 DBI, ACBP diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein) no 0.70
18 mRNA_7909 16277 Hypothetical Protein no 0.69
19 mRNA_7055 15423 K03841 FBP, fbp fructose-1,6-bisphosphatase I no 0.69
20 mRNA_517 8885 K07508 ACAA2 acetyl-CoA acyltransferase 2 no 0.69