Top cofit genes for mRNA_549 from Rhodosporidium toruloides IFO0880

mRNA_549 8917 : K12618 XRN1, SEP1, KEM1 5'-3' exoribonuclease 1

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5357 13725 HMMPfam-Methyltransferase domain-PF12847,SUPERFAMILY--SSF53335 no 0.85
2 mRNA_5463 13831 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.84
3 mRNA_2672 11040 K20032 ZDHHC13_17, HIP14 palmitoyltransferase ZDHHC13/17 no 0.84
4 mRNA_1920 10288 Hypothetical Protein no 0.84
5 mRNA_8120 16488 Hypothetical Protein no 0.83
6 mRNA_2564 10932 SUPERFAMILY--SSF52058 no 0.83
7 mRNA_2587 10955 K04368 MAP2K1, MEK1 mitogen-activated protein kinase kinase 1 no 0.82
8 mRNA_8312 16680 K17868 DPH7, RRT2 diphthine methyl ester acylhydrolase no 0.82
9 mRNA_3456 11824 HMMPfam-Family of unknown function (DUF500)-PF04366 no 0.82
10 mRNA_2865 11233 SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717 no 0.81
11 mRNA_269 8637 BLAST nitrogen assimilation transcription factor [Rhodo... no 0.81
12 mRNA_5107 13475 K03130 TAF5 transcription initiation factor TFIID subunit 5 no 0.80
13 mRNA_2955 11323 Hypothetical Protein no 0.80
14 mRNA_1267 9635 K00814 GPT, ALT alanine transaminase no 0.79
15 mRNA_3128 11496 BLAST protein transporter [Pseudozyma hubeiensis SY62] no 0.79
16 mRNA_996 9364 K19791 FET3_5 iron transport multicopper oxidase no 0.79
17 mRNA_1237 9605 SUPERFAMILY--SSF52047 no 0.79
18 mRNA_103 8471 Hypothetical Protein no 0.79
19 mRNA_2432 10800 K20028 ZDHHC2_15_20 palmitoyltransferase ZDHHC2/15/20 no 0.78
20 mRNA_319 8687 KOG2134 Polynucleotide kinase 3' phosphatase no 0.78