Top cofit genes for mRNA_540 from Rhodosporidium toruloides IFO0880

mRNA_540 8908 : KOG2571 Chitin synthase/hyaluronan synthase (glycosyltransferases)

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_7659 16027 BLAST acetylornithine transaminase [Moesziomyces antarc... no 0.93
2 mRNA_5031 13399 HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785 no 0.93
3 mRNA_13 8381 BLAST putative transmembrane protein [Rhizoctonia solani 123E] no 0.92
4 mRNA_299 8667 ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199 no 0.88
5 mRNA_707 9075 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.88
6 mRNA_6256 14624 Hypothetical Protein no 0.87
7 mRNA_5872 14240 HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233 no 0.87
8 mRNA_4175 12543 K03939 NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6 no 0.86
9 mRNA_144 8512 K00698 CHS1 chitin synthase no 0.86
10 mRNA_7055 15423 K03841 FBP, fbp fructose-1,6-bisphosphatase I no 0.86
11 mRNA_3170 11538 Hypothetical Protein no 0.86
12 mRNA_7137 15505 KOG1933 Cholesterol transport protein (Niemann-Pick C disease protein) no 0.86
13 mRNA_4484 12852 KOG2588 Predicted DNA-binding protein no 0.85
14 mRNA_1468 9836 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.84
15 mRNA_4689 13057 Hypothetical Protein no 0.83
16 mRNA_5646 14014 K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase no 0.83
17 mRNA_8369 16737 HMMPfam-Transient receptor potential (TRP) ion channel-PF06011 no 0.82
18 mRNA_2577 10945 HMMPfam-Protein of unknown function (DUF3767)-PF12597 no 0.82
19 mRNA_6843 15211 BLAST protein of unknown function [Taphrina deformans PYCC ... no 0.82
20 mRNA_4203 12571 K19842 ROM1_2 RHO1 GDP-GTP exchange protein 1/2 no 0.82