Top cofit genes for mRNA_465 from Rhodosporidium toruloides IFO0880

mRNA_465 8833 : K10858 PMS2 DNA mismatch repair protein PMS2

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_319 8687 KOG2134 Polynucleotide kinase 3' phosphatase no 0.85
2 mRNA_7735 16103 Hypothetical Protein no 0.78
3 mRNA_5107 13475 K03130 TAF5 transcription initiation factor TFIID subunit 5 no 0.77
4 mRNA_2502 10870 BLAST expressed protein [Cryptococcus neoformans var. neofo... no 0.76
5 mRNA_549 8917 K12618 XRN1, SEP1, KEM1 5'-3' exoribonuclease 1 no 0.75
6 mRNA_5536 13904 Hypothetical Protein no 0.75
7 mRNA_3128 11496 BLAST protein transporter [Pseudozyma hubeiensis SY62] no 0.75
8 mRNA_1497 9865 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.74
9 mRNA_6101 14469 KOG1303 Amino acid transporters no 0.74
10 mRNA_2275 10643 HMMPfam-MAPEG family-PF01124,SUPERFAMILY--SSF161084 no 0.73
11 mRNA_2230 10598 HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112 no 0.73
12 mRNA_1227 9595 KOG1318 Helix loop helix transcription factor EB no 0.73
13 mRNA_1920 10288 Hypothetical Protein no 0.72
14 mRNA_5866 14234 KOG1454 Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) no 0.71
15 mRNA_4871 13239 K03777 dld D-lactate dehydrogenase no 0.71
16 mRNA_8227 16595 BLAST Post-SET domain protein [Cordyceps confragosa RCEF 1005] no 0.71
17 mRNA_5382 13750 Hypothetical Protein no 0.71
18 mRNA_4966 13334 Hypothetical Protein no 0.71
19 mRNA_7410 15778 BLAST capsular associated protein [Coprinopsis cinerea ... no 0.70
20 mRNA_2691 11059 Hypothetical Protein no 0.70