Top cofit genes for mRNA_442 from Rhodosporidium toruloides IFO0880

mRNA_442 8810 : K11835 USP4_11_15, UBP12 ubiquitin carboxyl-terminal hydrolase 4/11/15

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_632 9000 K17900 ATG15, AUT5 lipase ATG15 no 0.85
2 mRNA_6291 14659 K12182 HGS, HRS, VPS27 hepatocyte growth factor-regulated tyrosine kinase substrate no 0.85
3 mRNA_7121 15489 PRINTS-Proline rich extensin signature-PR01217,ProSiteProfiles-EH domain profile.-PS50031 no 0.80
4 mRNA_8398 16766 HMMPfam-Histone deacetylation protein Rxt3-PF08642 no 0.79
5 mRNA_1217 9585 K10580 UBE2N, BLU, UBC13 ubiquitin-conjugating enzyme E2 N no 0.79
6 mRNA_5688 14056 K12199 VTA1, LIP5 vacuolar protein sorting-associated protein VTA1 no 0.79
7 mRNA_3685 12053 KOG4212 RNA-binding protein hnRNP-M no 0.78
8 mRNA_6979 15347 KOG2789 Putative Zn-finger protein no 0.78
9 mRNA_783 9151 HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481 no 0.77
10 mRNA_4547 12915 ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199 no 0.77
11 mRNA_641 9009 K08333 PIK3R4, VPS15 phosphoinositide-3-kinase, regulatory subunit 4 no 0.77
12 mRNA_2322 10690 Hypothetical Protein no 0.76
13 mRNA_1292 9660 K10848 ERCC4, XPF DNA excision repair protein ERCC-4 no 0.76
14 mRNA_506 8874 K08793 STK32, YANK serine/threonine kinase 32 no 0.76
15 mRNA_626 8994 K19423 epsE glycosyltransferase EpsE no 0.76
16 mRNA_1946 10314 KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif no 0.76
17 mRNA_6797 15165 BLAST Formin-like protein 3 [Rhizoctonia solani] no 0.76
18 mRNA_8394 16762 KOG3680 Uncharacterized conserved protein no 0.75
19 mRNA_3758 12126 HMMPfam-Glycosyl hydrolases family 15-PF00723,SUPERFAMILY--SSF48208 no 0.75
20 mRNA_7739 16107 K20476 RIC1 RAB6A-GEF complex partner protein 1 no 0.75