Top cofit genes for mRNA_389 from Rhodosporidium toruloides IFO0880

mRNA_389 8757 : HMMPfam-Vacuolar sorting protein 9 (VPS9) domain-PF02204,ProSiteProfiles-VPS9 domain profile.-PS51205,SUPERFAMILY--SSF109993

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5141 13509 K12198 CHMP5, VPS60 charged multivesicular body protein 5 no 0.80
2 mRNA_936 9304 K10365 CAPZB capping protein (actin filament) muscle Z-line, beta no 0.77
3 mRNA_5609 13977 HMMPfam-Leucine Rich Repeat-PF00560,ProSiteProfiles-Leucine-rich repeat profile.-PS51450,SMART-Leucine-rich repeats, typical (most populated) subfamily-SM00369,SUPERFAMILY--SSF52058 no 0.75
4 mRNA_7326 15694 K01969 E6.4.1.4B 3-methylcrotonyl-CoA carboxylase beta subunit no 0.75
5 mRNA_3527 11895 K08658 RCE1, FACE2 prenyl protein peptidase no 0.74
6 mRNA_2064 10432 KOG3839 Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans no 0.73
7 mRNA_2366 10734 HMMPfam-GDP/GTP exchange factor Sec2p-PF06428,SUPERFAMILY--SSF144284 no 0.73
8 mRNA_2399 10767 Hypothetical Protein no 0.73
9 mRNA_4630 12998 Hypothetical Protein no 0.72
10 mRNA_4525 12893 KOG0143 Iron/ascorbate family oxidoreductases no 0.72
11 mRNA_8339 16707 K06180 rluD 23S rRNA pseudouridine1911/1915/1917 synthase no 0.71
12 mRNA_7943 16311 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.71
13 mRNA_3105 11473 KOG1515 Arylacetamide deacetylase no 0.71
14 mRNA_1144 9512 K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial no 0.71
15 mRNA_7341 15709 KOG4062 6-O-methylguanine-DNA methyltransferase MGMT/MGT1, involved in DNA repair no 0.71
16 mRNA_4770 13138 KOG0988 RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference no 0.70
17 mRNA_7090 15458 Hypothetical Protein no 0.70
18 mRNA_7667 16035 Hypothetical Protein no 0.70
19 mRNA_7356 15724 HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 no 0.70
20 mRNA_4971 13339 BLAST transmembrane protein, putative [Rhizoctonia solani A... no 0.69