Top cofit genes for mRNA_248 from Rhodosporidium toruloides IFO0880

mRNA_248 8616 : K01796 E5.1.99.4, AMACR, mcr alpha-methylacyl-CoA racemase

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5716 14084 Hypothetical Protein no 0.75
2 mRNA_7678 16046 K00657 speG diamine N-acetyltransferase no 0.74
3 mRNA_7278 15646 HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.72
4 mRNA_8283 16651 HMMPfam-Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region-PF00645,PRINTS-Histone H5 signature-PR00624,ProSiteProfiles-Poly(ADP-ribose) polymerase zinc finger domain profile.-PS50064,SUPERFAMILY--SSF57716 no 0.70
5 mRNA_3928 12296 HMMPfam-Fungalysin metallopeptidase (M36)-PF02128,HMMPfam-Fungalysin/Thermolysin Propeptide Motif-PF07504,PRINTS-Fungalysin metallopeptidase (M36) signature-PR00999,SUPERFAMILY--SSF55486 no 0.70
6 mRNA_7429 15797 KOG0254 Predicted transporter (major facilitator superfamily) no 0.70
7 mRNA_7707 16075 HMMPfam-PAZ domain-PF02170,HMMPfam-Piwi domain-PF02171,HMMPfam-Domain of unknown function (DUF1785)-PF08699,ProSiteProfiles-PAZ domain profile.-PS50821,ProSiteProfiles-Piwi domain profile.-PS50822,SMART--SM00950,SUPERFAMILY--SSF101690,SUPERFAMILY--SSF53098 no 0.69
8 mRNA_6750 15118 SUPERFAMILY--SSF47473 no 0.69
9 mRNA_7456 15824 Hypothetical Protein no 0.69
10 mRNA_2540 10908 SUPERFAMILY--SSF52058 no 0.68
11 mRNA_5152 13520 HMMPfam-Domain of unknown function (DUF4336)-PF14234,SUPERFAMILY--SSF56281 no 0.68
12 mRNA_2184 10552 Hypothetical Protein no 0.67
13 mRNA_2394 10762 K03648 UNG, UDG uracil-DNA glycosylase no 0.65
14 mRNA_7568 15936 K18753 ZFP36L butyrate response factor 1 no 0.64
15 mRNA_5243 13611 KOG1601 GATA-4/5/6 transcription factors no 0.64
16 mRNA_5997 14365 BLAST expressed protein [Cryptococcus neoformans var. neofo... no 0.63
17 mRNA_5197 13565 Hypothetical Protein no 0.63
18 mRNA_2988 11356 KOG1212 Amidases no 0.63
19 mRNA_301 8669 Hypothetical Protein no 0.63
20 mRNA_7325 15693 K01640 E4.1.3.4, HMGCL, hmgL hydroxymethylglutaryl-CoA lyase no 0.63