Top cofit genes for mRNA_214 from Rhodosporidium toruloides IFO0880

mRNA_214 8582 : Hypothetical Protein

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_907 9275 K20523 SH3YL1 SH3 domain-containing YSC84-like protein 1 no 0.81
2 mRNA_2582 10950 HMMPfam-Ribosomal protein L35-PF01632,PRINTS-Ribosomal protein L35 signature-PR00064,ProSitePatterns-Ribosomal protein L35 signature.-PS00936,SUPERFAMILY--SSF143034 no 0.77
3 mRNA_327 8695 KOG0378 40S ribosomal protein S4 no 0.76
4 mRNA_8113 16481 HMMPfam-Thioesterase-like superfamily-PF13279,SUPERFAMILY--SSF54637 no 0.75
5 mRNA_6976 15344 K14002 SCJ1 DnaJ-related protein SCJ1 no 0.75
6 mRNA_2053 10421 KOG2450 Aldehyde dehydrogenase no 0.74
7 mRNA_609 8977 K19001 HELLS, DDM1 ATP-dependent DNA helicase no 0.73
8 mRNA_1351 9719 Hypothetical Protein no 0.72
9 mRNA_154 8522 Hypothetical Protein no 0.72
10 mRNA_4902 13270 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.72
11 mRNA_6970 15338 Hypothetical Protein no 0.71
12 mRNA_5945 14313 Hypothetical Protein no 0.71
13 mRNA_6199 14567 HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112 no 0.71
14 mRNA_7893 16261 KOG0928 Pattern-formation protein/guanine nucleotide exchange factor no 0.70
15 mRNA_5637 14005 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.70
16 mRNA_3906 12274 K03495 gidA, mnmG, MTO1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme no 0.69
17 mRNA_8081 16449 K00905 BCKDK [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase no 0.69
18 mRNA_1916 10284 HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Domain of unknown function (DUF3425)-PF11905,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 no 0.69
19 mRNA_5517 13885 PRINTS-Proline rich extensin signature-PR01217 no 0.68
20 mRNA_4374 12742 K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase no 0.68