Top cofit genes for mRNA_185 from Rhodosporidium toruloides IFO0880

mRNA_185 8553 : K11874 UBP16 ubiquitin carboxyl-terminal hydrolase 16

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2453 10821 HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180 no 0.80
2 mRNA_7786 16154 HMMPfam-Centromere-associated protein K-PF11802 no 0.73
3 mRNA_4178 12546 KOG1337 N-methyltransferase no 0.72
4 mRNA_3654 12022 K11204 GCLC glutamate--cysteine ligase catalytic subunit no 0.69
5 mRNA_2757 11125 Hypothetical Protein no 0.68
6 mRNA_2535 10903 Hypothetical Protein no 0.68
7 mRNA_3545 11913 HMMPfam-SAP domain-PF02037,ProSiteProfiles-SAP motif profile.-PS50800,SMART-Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation-SM00513,SUPERFAMILY--SSF68906 no 0.68
8 mRNA_7571 15939 K11450 KDM1A, AOF2, LSD1 lysine-specific histone demethylase 1A no 0.67
9 mRNA_3207 11575 Hypothetical Protein no 0.65
10 mRNA_8153 16521 HMMPfam-Chalcone-flavanone isomerase-PF02431,SUPERFAMILY--SSF54626 no 0.65
11 mRNA_7230 15598 K07019 K07019 uncharacterized protein no 0.64
12 mRNA_6206 14574 K10524 NRK1_2 nicotinamide/nicotinate riboside kinase no 0.63
13 mRNA_2631 10999 K14803 PTC2_3 protein phosphatase PTC2/3 no 0.63
14 mRNA_8105 16473 Hypothetical Protein no 0.62
15 mRNA_3101 11469 K01490 AMPD AMP deaminase no 0.61
16 mRNA_4191 12559 HMMPfam-GAF domain-PF13492,SMART-Domain present in phytochromes and cGMP-specific phosphodiesterases.-SM00065,SUPERFAMILY--SSF55781 no 0.60
17 mRNA_2812 11180 Hypothetical Protein no 0.60
18 mRNA_6647 15015 HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648 no 0.60
19 mRNA_6219 14587 HMMPfam-Sec20-PF03908 no 0.60
20 mRNA_8 8376 K01194 TREH, treA, treF alpha,alpha-trehalase no 0.60