Top cofit genes for mRNA_155 from Rhodosporidium toruloides IFO0880

mRNA_155 8523 : K20069 NECAP1_2 adaptin ear-binding coat-associated protein 1/2

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1409 9777 ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257 no 0.76
2 mRNA_4657 13025 Hypothetical Protein no 0.75
3 mRNA_4212 12580 KOG1968 Replication factor C, subunit RFC1 (large subunit) no 0.72
4 mRNA_7430 15798 HMMPfam-Methyltransferase domain-PF13489,SUPERFAMILY--SSF53335 no 0.71
5 mRNA_5170 13538 Hypothetical Protein no 0.71
6 mRNA_163 8531 Hypothetical Protein no 0.71
7 mRNA_743 9111 K08493 VTI1 vesicle transport through interaction with t-SNAREs 1 no 0.69
8 mRNA_2227 10595 K12392 AP1B1 AP-1 complex subunit beta-1 no 0.69
9 mRNA_7533 15901 K10885 XRCC5, KU80, G22P2 ATP-dependent DNA helicase 2 subunit 2 no 0.68
10 mRNA_5269 13637 K03320 amt, AMT, MEP ammonium transporter, Amt family no 0.68
11 mRNA_1028 9396 HMMPfam-Domain of unknown function (DUF2411)-PF10304,SUPERFAMILY--SSF48371 no 0.67
12 mRNA_3739 12107 HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,ProSiteProfiles-Expansin, family-45 endoglucanase-like domain profile.-PS50842,SUPERFAMILY--SSF50685 no 0.66
13 mRNA_4610 12978 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.66
14 mRNA_4971 13339 BLAST transmembrane protein, putative [Rhizoctonia solani A... no 0.66
15 mRNA_1423 9791 Hypothetical Protein no 0.65
16 mRNA_4631 12999 SUPERFAMILY--SSF103506 no 0.65
17 mRNA_7752 16120 Hypothetical Protein no 0.64
18 mRNA_3469 11837 K07512 MECR, NRBF1 mitochondrial trans-2-enoyl-CoA reductase no 0.64
19 mRNA_4379 12747 KOG4359 Protein kinase C inhibitor-like protein no 0.64
20 mRNA_7943 16311 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.63