Top cofit genes for mRNA_89 from Rhodosporidium toruloides IFO0880

mRNA_89 8457 : HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1848 10216 BLAST PC-Esterase [Xanthophyllomyces dendrorhous] no 0.67
2 mRNA_2447 10815 Hypothetical Protein no 0.62
3 mRNA_1043 9411 K16732 PRC1 protein regulator of cytokinesis 1 no 0.62
4 mRNA_5880 14248 HMMPfam-Transglycosylase SLT domain-PF01464,SUPERFAMILY--SSF53955 no 0.61
5 mRNA_5644 14012 Hypothetical Protein no 0.61
6 mRNA_5416 13784 K04496 CTBP C-terminal binding protein no 0.61
7 mRNA_7591 15959 Hypothetical Protein no 0.60
8 mRNA_3958 12326 Hypothetical Protein no 0.59
9 mRNA_3235 11603 Hypothetical Protein no 0.59
10 mRNA_1229 9597 SUPERFAMILY--SSF52047 no 0.57
11 mRNA_1573 9941 KOG2022 Nuclear transport receptor LGL2 (importin beta superfamily) no 0.57
12 mRNA_2949 11317 K02267 COX6B cytochrome c oxidase subunit 6b no 0.56
13 mRNA_1334 9702 HMMPfam-RNA polymerase II transcription elongation factor-PF09816 no 0.55
14 mRNA_5278 13646 KOG1488 Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) no 0.55
15 mRNA_7423 15791 K01568 PDC, pdc pyruvate decarboxylase no 0.54
16 mRNA_7160 15528 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 no 0.54
17 mRNA_5763 14131 HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF51004 no 0.54
18 mRNA_7367 15735 HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 no 0.54
19 mRNA_5478 13846 SUPERFAMILY--SSF81383 no 0.53
20 mRNA_1474 9842 Hypothetical Protein no 0.53