Top cofit genes for mRNA_70 from Rhodosporidium toruloides IFO0880

mRNA_70 8438 : HMMPfam-Membrane-associating domain-PF01284

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5024 13392 K11124 SMG6, EST1A protein SMG6 no 0.78
2 mRNA_8286 16654 HMMPfam-GATA zinc finger-PF00320,ProSiteProfiles-GATA-type zinc finger domain profile.-PS50114,SMART-zinc finger binding to DNA consensus sequence [AT]GATA[AG]-SM00401,SUPERFAMILY--SSF57716 no 0.75
3 mRNA_6125 14493 KOG1477 SPRY domain-containing proteins no 0.74
4 mRNA_1136 9504 Hypothetical Protein no 0.74
5 mRNA_7156 15524 K20102 YTHDF YTH domain-containing family protein no 0.73
6 mRNA_6389 14757 HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112 no 0.73
7 mRNA_6839 15207 K17257 ITFG1 integrin alpha FG-GAP repeat containing protein 1 no 0.73
8 mRNA_3766 12134 K20372 TBC1D20, GYP8 TBC1 domain family member 20 no 0.72
9 mRNA_87 8455 BLAST HAP1, N-terminal [Xanthophyllomyces dendrorhous] no 0.72
10 mRNA_6461 14829 Hypothetical Protein no 0.72
11 mRNA_7876 16244 HMMPfam-Protein of unknown function (DUF4246)-PF14033 no 0.72
12 mRNA_3674 12042 K00128 ALDH aldehyde dehydrogenase (NAD+) no 0.71
13 mRNA_706 9074 BLAST Myelin gene regulatory factor [Chaetura pelagica] no 0.71
14 mRNA_1571 9939 K03695 clpB ATP-dependent Clp protease ATP-binding subunit ClpB no 0.71
15 mRNA_3437 11805 K03033 PSMD3, RPN3 26S proteasome regulatory subunit N3 no 0.71
16 mRNA_3107 11475 K11412 SIRT2, SIR2L2 NAD-dependent deacetylase sirtuin 2 no 0.71
17 mRNA_6585 14953 K14850 RRP8 ribosomal RNA-processing protein 8 no 0.71
18 mRNA_6057 14425 Hypothetical Protein no 0.71
19 mRNA_5560 13928 BLAST PROTEIN D2013.6 [Ceraceosorus bombacis] no 0.71
20 mRNA_4508 12876 KOG2263 Methionine synthase II (cobalamin-independent) no 0.70