Top cofit genes for mRNA_69 from Rhodosporidium toruloides IFO0880

mRNA_69 8437 : K03029 PSMD4, RPN10 26S proteasome regulatory subunit N10

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_7632 16000 KOG0383 Predicted helicase no 0.75
2 mRNA_3703 12071 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.74
3 mRNA_8228 16596 K11648 SMARCB1, SNF5, INI1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 no 0.74
4 mRNA_3602 11970 K10839 RAD23, HR23 UV excision repair protein RAD23 no 0.71
5 mRNA_7447 15815 HMMPfam-Uncharacterized protein conserved in bacteria (DUF2236)-PF09995 no 0.68
6 mRNA_5196 13564 K17218 sqr sulfide-quinone oxidoreductase no 0.68
7 mRNA_2807 11175 K11485 MTF2, PCL2 polycomb-like protein 2 no 0.67
8 mRNA_2825 11193 HMMPfam-F-box-like-PF12937 no 0.67
9 mRNA_7780 16148 KOG0376 Serine-threonine phosphatase 2A, catalytic subunit no 0.67
10 mRNA_5858 14226 HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SUPERFAMILY--SSF57959 no 0.64
11 mRNA_3041 11409 KOG0252 Inorganic phosphate transporter no 0.64
12 mRNA_1841 10209 KOG4476 Gluconate transport-inducing protein no 0.63
13 mRNA_7847 16215 KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily no 0.63
14 mRNA_5071 13439 KOG3038 Histone acetyltransferase SAGA associated factor SGF29 no 0.62
15 mRNA_885 9253 K10590 TRIP12 E3 ubiquitin-protein ligase TRIP12 no 0.61
16 mRNA_6013 14381 Hypothetical Protein no 0.61
17 mRNA_7681 16049 Hypothetical Protein no 0.61
18 mRNA_4093 12461 Hypothetical Protein no 0.61
19 mRNA_4876 13244 K20133 USP6NL USP6 N-terminal-like protein no 0.60
20 mRNA_7541 15909 K04564 SOD2 superoxide dismutase, Fe-Mn family no 0.59