Top cofit genes for mRNA_29 from Rhodosporidium toruloides IFO0880

mRNA_29 8397 : HMMPfam-Swi5-PF07061

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3451 11819 HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.78
2 mRNA_2947 11315 Hypothetical Protein no 0.76
3 mRNA_8383 16751 Interpro Stealth protein CR2, conserved region 2 Stealth protein CR3, conserved region 3 no 0.74
4 mRNA_7261 15629 SUPERFAMILY--SSF51735 no 0.71
5 mRNA_2833 11201 KOG0254 Predicted transporter (major facilitator superfamily) no 0.71
6 mRNA_3280 11648 Hypothetical Protein no 0.71
7 mRNA_7887 16255 HMMPfam-Uncharacterized conserved protein (DUF2183)-PF09949 no 0.70
8 mRNA_3147 11515 Hypothetical Protein no 0.70
9 mRNA_1343 9711 K00698 CHS1 chitin synthase no 0.69
10 mRNA_2503 10871 SUPERFAMILY--SSF63829 no 0.69
11 mRNA_7436 15804 Hypothetical Protein no 0.68
12 mRNA_5040 13408 K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2 no 0.68
13 mRNA_284 8652 K01762 ACS 1-aminocyclopropane-1-carboxylate synthase no 0.68
14 mRNA_5471 13839 KOG4696 Uncharacterized conserved protein no 0.68
15 mRNA_1722 10090 KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily no 0.68
16 mRNA_2427 10795 Hypothetical Protein no 0.68
17 mRNA_3136 11504 KOG2615 Permease of the major facilitator superfamily no 0.67
18 mRNA_7079 15447 Hypothetical Protein no 0.67
19 mRNA_3928 12296 HMMPfam-Fungalysin metallopeptidase (M36)-PF02128,HMMPfam-Fungalysin/Thermolysin Propeptide Motif-PF07504,PRINTS-Fungalysin metallopeptidase (M36) signature-PR00999,SUPERFAMILY--SSF55486 no 0.67
20 mRNA_4193 12561 Hypothetical Protein no 0.67