Top cofit genes for mRNA_7 from Rhodosporidium toruloides IFO0880

mRNA_7 8375 : HMMPfam-LIM-domain binding protein-PF01803,PRINTS-Proline rich extensin signature-PR01217

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3772 12140 K17662 CBP3, UQCC cytochrome b pre-mRNA-processing protein 3 no 0.75
2 mRNA_1599 9967 HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 no 0.73
3 mRNA_563 8931 K05287 PIGF phosphatidylinositol glycan, class F no 0.73
4 mRNA_6758 15126 HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601 no 0.72
5 mRNA_3796 12164 Hypothetical Protein no 0.71
6 mRNA_3826 12194 Hypothetical Protein no 0.71
7 mRNA_3033 11401 BLAST related to transcription factor medusa [Melanopsichiu... no 0.71
8 mRNA_4744 13112 HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994 no 0.70
9 mRNA_5737 14105 HMMPfam-Arsenite-resistance protein 2-PF04959,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157 no 0.70
10 mRNA_201 8569 K00294 E1.2.1.88 1-pyrroline-5-carboxylate dehydrogenase no 0.70
11 mRNA_7507 15875 K17987 NBR1 next to BRCA1 gene 1 protein no 0.70
12 mRNA_8320 16688 KOG1516 Carboxylesterase and related proteins no 0.69
13 mRNA_1613 9981 K01228 GCS1 mannosyl-oligosaccharide glucosidase no 0.69
14 mRNA_927 9295 KOG1611 Predicted short chain-type dehydrogenase no 0.69
15 mRNA_4320 12688 K03255 TIF31, CLU1 protein TIF31 no 0.69
16 mRNA_7397 15765 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.68
17 mRNA_4277 12645 K08773 RALBP1 RalA-binding protein 1 no 0.68
18 mRNA_7527 15895 K20031 ZDHHC6 palmitoyltransferase ZDHHC6 no 0.68
19 mRNA_7725 16093 Hypothetical Protein no 0.68
20 mRNA_1326 9694 KOG1239 Inner membrane protein translocase involved in respiratory chain assembly no 0.68