Top cofit genes for mRNA_1 from Rhodosporidium toruloides IFO0880

mRNA_1 8369 : K12198 CHMP5, VPS60 charged multivesicular body protein 5

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1699 10067 K10751 CHAF1B chromatin assembly factor 1 subunit B no 0.87
2 mRNA_5066 13434 KOG3170 Conserved phosducin-like protein no 0.82
3 mRNA_999 9367 HMMPfam-PAPA-1-like conserved region-PF04795 no 0.80
4 mRNA_3251 11619 K19986 EXOC8, SEC84 exocyst complex component 8 no 0.80
5 mRNA_6768 15136 HMMPfam-DNA repair protein endonuclease SAE2/CtIP C-terminus-PF08573 no 0.79
6 mRNA_7924 16292 Hypothetical Protein no 0.78
7 mRNA_4976 13344 Hypothetical Protein no 0.78
8 mRNA_4390 12758 K16261 YAT yeast amino acid transporter no 0.78
9 mRNA_645 9013 KOG3104 Mod5 protein sorting/negative effector of RNA Pol III synthesis no 0.77
10 mRNA_6114 14482 Hypothetical Protein no 0.77
11 mRNA_6562 14930 K20353 SEC16 COPII coat assembly protein SEC16 no 0.76
12 mRNA_7292 15660 SUPERFAMILY--SSF56112 no 0.75
13 mRNA_7959 16327 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 no 0.75
14 mRNA_1359 9727 K06018 PPN1 endopolyphosphatase no 0.75
15 mRNA_7818 16186 K10865 MRE11 double-strand break repair protein MRE11 no 0.75
16 mRNA_2779 11147 K18278 THI5 pyrimidine precursor biosynthesis enzyme no 0.74
17 mRNA_729 9097 BLAST CMGC/DYRK/DYRK2 protein kinase [Microbotryum lychnidi... no 0.74
18 mRNA_7943 16311 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.74
19 mRNA_6676 15044 KOG3138 Predicted N-acetyltransferase no 0.74
20 mRNA_2389 10757 K10901 BLM, RECQL3, SGS1 bloom syndrome protein no 0.74