Top cofit genes for mRNA_8339 from Rhodosporidium toruloides IFO0880

mRNA_8339 16707 : K06180 rluD 23S rRNA pseudouridine1911/1915/1917 synthase

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_7090 15458 Hypothetical Protein no 0.91
2 mRNA_1144 9512 K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial no 0.90
3 mRNA_3500 11868 KOG2519 5'-3' exonuclease no 0.85
4 mRNA_362 8730 HMMPfam-CENP-S associating Centromere protein X-PF09415,SUPERFAMILY--SSF47113 no 0.84
5 mRNA_6737 15105 KOG0516 Dystonin, GAS (Growth-arrest-specific protein), and related proteins no 0.83
6 mRNA_5080 13448 K12486 SMAP stromal membrane-associated protein no 0.83
7 mRNA_4630 12998 Hypothetical Protein no 0.83
8 mRNA_6846 15214 K02603 ORC1 origin recognition complex subunit 1 no 0.83
9 mRNA_5141 13509 K12198 CHMP5, VPS60 charged multivesicular body protein 5 no 0.82
10 mRNA_5765 14133 Interpro Promethin no 0.82
11 mRNA_5327 13695 Hypothetical Protein no 0.82
12 mRNA_936 9304 K10365 CAPZB capping protein (actin filament) muscle Z-line, beta no 0.82
13 mRNA_5626 13994 KOG1611 Predicted short chain-type dehydrogenase no 0.82
14 mRNA_4644 13012 Hypothetical Protein no 0.81
15 mRNA_5835 14203 Hypothetical Protein no 0.81
16 mRNA_4194 12562 K01934 MTHFS 5-formyltetrahydrofolate cyclo-ligase no 0.81
17 mRNA_4770 13138 KOG0988 RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference no 0.81
18 mRNA_556 8924 HMMPfam-Acetyltransferase (GNAT) domain-PF13302,SUPERFAMILY--SSF55729 no 0.81
19 mRNA_3312 11680 Hypothetical Protein no 0.81
20 mRNA_6484 14852 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.80