Top cofit genes for mRNA_8275 from Rhodosporidium toruloides IFO0880

mRNA_8275 16643 : K00102 dld, LDHD D-lactate dehydrogenase (cytochrome)

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5469 13837 HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins retinal binding site.-PS00327,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321 no 0.77
2 mRNA_6232 14600 K17450 ACO2 homoaconitase no 0.75
3 mRNA_4764 13132 K12842 SR140 U2-associated protein SR140 no 0.74
4 mRNA_6923 15291 Hypothetical Protein no 0.74
5 mRNA_6998 15366 K00288 MTHFD methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase no 0.72
6 mRNA_6488 14856 K01655 LYS21, LYS20 homocitrate synthase no 0.69
7 mRNA_4910 13278 K14555 UTP13, TBL3 U3 small nucleolar RNA-associated protein 13 no 0.68
8 mRNA_7476 15844 K07243 FTR, FTH1, efeU high-affinity iron transporter no 0.68
9 mRNA_180 8548 K01647 CS, gltA citrate synthase no 0.67
10 mRNA_8207 16575 K09578 PIN1 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 no 0.67
11 mRNA_7648 16016 K01705 LYS4 homoaconitate hydratase no 0.67
12 mRNA_8116 16484 K00949 thiN, TPK1, THI80 thiamine pyrophosphokinase no 0.67
13 mRNA_3800 12168 K14715 SLC39A9, ZIP9 solute carrier family 39 (zinc transporter), member 9 no 0.66
14 mRNA_5891 14259 K11788 ADE5 phosphoribosylamine--glycine ligase / phosphoribosylformylglycinamidine cyclo-ligase no 0.66
15 mRNA_3880 12248 K00262 E1.4.1.4, gdhA glutamate dehydrogenase (NADP+) no 0.66
16 mRNA_3632 12000 HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112 no 0.66
17 mRNA_2060 10428 K05824 LYS12 homoisocitrate dehydrogenase no 0.65
18 mRNA_5075 13443 K00958 sat, met3 sulfate adenylyltransferase no 0.64
19 mRNA_3683 12051 KOG0069 Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) no 0.64
20 mRNA_5017 13385 K08963 mtnA methylthioribose-1-phosphate isomerase no 0.64