Top cofit genes for mRNA_8217 from Rhodosporidium toruloides IFO0880

mRNA_8217 16585 : KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_994 9362 K08513 VAMP4 vesicle-associated membrane protein 4 no 0.86
2 mRNA_4689 13057 Hypothetical Protein no 0.83
3 mRNA_1657 10025 K08286 E2.7.11.- protein-serine/threonine kinase no 0.82
4 mRNA_4639 13007 KOG3469 Cytochrome c oxidase, subunit VIa/COX13 no 0.81
5 mRNA_6051 14419 Hypothetical Protein no 0.81
6 mRNA_8186 16554 Hypothetical Protein no 0.80
7 mRNA_707 9075 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.80
8 mRNA_836 9204 K17387 KIF23 kinesin family member 23 no 0.79
9 mRNA_7379 15747 SUPERFAMILY--SSF49344 no 0.79
10 mRNA_4476 12844 HMMPfam-Domain of unknown function (DUF543)-PF04418 no 0.79
11 mRNA_4741 13109 KOG2208 Vigilin no 0.78
12 mRNA_5838 14206 Hypothetical Protein no 0.78
13 mRNA_13 8381 BLAST putative transmembrane protein [Rhizoctonia solani 123E] no 0.78
14 mRNA_5031 13399 HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785 no 0.77
15 mRNA_6242 14610 K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase no 0.77
16 mRNA_7390 15758 HMMPfam-Ubiquinol-cytochrome C reductase hinge protein-PF02320,SUPERFAMILY--SSF81531 no 0.77
17 mRNA_8431 16799 K15105 SLC25A12_13, AGC solute carrier family 25 (mitochondrial aspartate/glutamate transporter), member 12/13 no 0.77
18 mRNA_4175 12543 K03939 NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6 no 0.77
19 mRNA_7159 15527 HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 no 0.77
20 mRNA_2496 10864 KOG0254 Predicted transporter (major facilitator superfamily) no 0.77