Top cofit genes for mRNA_8148 from Rhodosporidium toruloides IFO0880

mRNA_8148 16516 : HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_6552 14920 K03127 TAF13 transcription initiation factor TFIID subunit 13 no 0.87
2 mRNA_7682 16050 Hypothetical Protein no 0.84
3 mRNA_1866 10234 KOG4455 Uncharacterized conserved protein no 0.80
4 mRNA_7133 15501 Hypothetical Protein no 0.79
5 mRNA_7876 16244 HMMPfam-Protein of unknown function (DUF4246)-PF14033 no 0.79
6 mRNA_4275 12643 HMMPfam-RhoGEF domain-PF00621,ProSiteProfiles-Dbl homology (DH) domain profile.-PS50010,SUPERFAMILY--SSF48065 no 0.78
7 mRNA_6346 14714 HMMPfam-Protein of unknown function (DUF938)-PF06080,SUPERFAMILY--SSF53335 no 0.75
8 mRNA_5203 13571 K06709 KDM4, JMJD2, JHDM3 jumonji domain-containing protein 2 no 0.75
9 mRNA_5804 14172 Hypothetical Protein no 0.74
10 mRNA_2513 10881 Hypothetical Protein no 0.74
11 mRNA_4637 13005 Hypothetical Protein no 0.74
12 mRNA_2185 10553 HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879 no 0.73
13 mRNA_4431 12799 Hypothetical Protein no 0.73
14 mRNA_2031 10399 BLAST TPR-like protein [Auricularia subglabra TFB-10046... no 0.73
15 mRNA_3200 11568 KOG1515 Arylacetamide deacetylase no 0.73
16 mRNA_38 8406 HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097 no 0.73
17 mRNA_7934 16302 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 no 0.73
18 mRNA_4213 12581 K01673 cynT, can carbonic anhydrase no 0.72
19 mRNA_8199 16567 Hypothetical Protein no 0.71
20 mRNA_3107 11475 K11412 SIRT2, SIR2L2 NAD-dependent deacetylase sirtuin 2 no 0.71