Top cofit genes for mRNA_7988 from Rhodosporidium toruloides IFO0880

mRNA_7988 16356 : HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_4971 13339 BLAST transmembrane protein, putative [Rhizoctonia solani A... no 0.81
2 mRNA_6551 14919 ProSiteProfiles-Zinc finger CCHC-type profile.-PS50158,SMART-zinc finger-SM00343,SUPERFAMILY--SSF57756 no 0.71
3 mRNA_8103 16471 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 no 0.69
4 mRNA_4207 12575 BLAST similar to An07g08470 [Aspergillus kawachii IFO 4308] no 0.69
5 mRNA_4715 13083 KOG1730 Thioredoxin-like protein no 0.69
6 mRNA_3969 12337 HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961 no 0.69
7 mRNA_7943 16311 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.68
8 mRNA_1073 9441 Hypothetical Protein no 0.67
9 mRNA_6275 14643 BLAST secreted protein [Melampsora larici-populina 98AG31] no 0.67
10 mRNA_6379 14747 Hypothetical Protein no 0.67
11 mRNA_5795 14163 KOG4842 Protein involved in sister chromatid separation and/or segregation no 0.67
12 mRNA_7826 16194 KOG2533 Permease of the major facilitator superfamily no 0.66
13 mRNA_1203 9571 K01049 ACHE acetylcholinesterase no 0.66
14 mRNA_3992 12360 KOG0627 Heat shock transcription factor no 0.66
15 mRNA_7971 16339 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 no 0.66
16 mRNA_419 8787 HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473 no 0.65
17 mRNA_5148 13516 K17918 SNX3_12 sorting nexin-3/12 no 0.64
18 mRNA_5718 14086 SUPERFAMILY--SSF50370 no 0.64
19 mRNA_8226 16594 KOG0849 Transcription factor PRD and related proteins, contain PAX and HOX domains no 0.63
20 mRNA_7248 15616 HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001 no 0.63