Top cofit genes for mRNA_7533 from Rhodosporidium toruloides IFO0880

mRNA_7533 15901 : K10885 XRCC5, KU80, G22P2 ATP-dependent DNA helicase 2 subunit 2

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_7537 15905 K13524 ABAT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase no 0.82
2 mRNA_4292 12660 HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899 no 0.81
3 mRNA_1423 9791 Hypothetical Protein no 0.79
4 mRNA_163 8531 Hypothetical Protein no 0.78
5 mRNA_4657 13025 Hypothetical Protein no 0.76
6 mRNA_8226 16594 KOG0849 Transcription factor PRD and related proteins, contain PAX and HOX domains no 0.76
7 mRNA_6584 14952 BLAST conserved fungal protein [Moniliophthora roreri M... no 0.76
8 mRNA_7943 16311 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.75
9 mRNA_8214 16582 BLAST NADH-ubiquinone oxidoreductase 9.5 kDa subunit [R... no 0.75
10 mRNA_5060 13428 HMMPfam-Glycosyl transferase family 2-PF00535,HMMPfam-Glycosyl transferase family 8-PF01501,HMMPfam-Glycosyl transferase 4-like domain-PF13579,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF53756 no 0.75
11 mRNA_6484 14852 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.74
12 mRNA_7737 16105 HMMPfam-Antibiotic biosynthesis monooxygenase-PF03992,SUPERFAMILY--SSF54909 no 0.74
13 mRNA_3469 11837 K07512 MECR, NRBF1 mitochondrial trans-2-enoyl-CoA reductase no 0.74
14 mRNA_5047 13415 HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112 no 0.74
15 mRNA_7556 15924 K12734 PPIL3 peptidyl-prolyl cis-trans isomerase-like 3 no 0.73
16 mRNA_3232 11600 ProSiteProfiles-BRCT domain profile.-PS50172 no 0.73
17 mRNA_5302 13670 K08711 ABCG2.PDR, CDR1 ATP-binding cassette, subfamily G (WHITE), member 2, PDR no 0.73
18 mRNA_1152 9520 KOG0069 Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) no 0.71
19 mRNA_4610 12978 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.71
20 mRNA_2179 10547 K06681 LTE1 Gdp/GTP exchange factor required for growth at low temperatures no 0.71