Top cofit genes for mRNA_7447 from Rhodosporidium toruloides IFO0880

mRNA_7447 15815 : HMMPfam-Uncharacterized protein conserved in bacteria (DUF2236)-PF09995

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_7791 16159 HMMPfam-Integral peroxisomal membrane peroxin-PF06398 no 0.70
2 mRNA_7681 16049 Hypothetical Protein no 0.69
3 mRNA_69 8437 K03029 PSMD4, RPN10 26S proteasome regulatory subunit N10 no 0.68
4 mRNA_3703 12071 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.68
5 mRNA_7632 16000 KOG0383 Predicted helicase no 0.68
6 mRNA_5196 13564 K17218 sqr sulfide-quinone oxidoreductase no 0.68
7 mRNA_7520 15888 K18725 POM152 nucleoporin POM152 no 0.64
8 mRNA_3343 11711 HMMPfam-alpha/beta hydrolase fold-PF07859,SUPERFAMILY--SSF53474 no 0.63
9 mRNA_1012 9380 Hypothetical Protein no 0.63
10 mRNA_1497 9865 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.61
11 mRNA_1232 9600 K12177 COPS3, CSN3 COP9 signalosome complex subunit 3 no 0.61
12 mRNA_2581 10949 K06096 VAPA vesicle-associated membrane protein-associated protein A no 0.60
13 mRNA_4983 13351 SUPERFAMILY--SSF48371 no 0.60
14 mRNA_1573 9941 KOG2022 Nuclear transport receptor LGL2 (importin beta superfamily) no 0.60
15 mRNA_6909 15277 K14315 NDC1, TMEM48 nucleoporin NDC1 no 0.59
16 mRNA_2525 10893 KOG0590 Checkpoint kinase and related serine/threonine protein kinases no 0.59
17 mRNA_2019 10387 K07088 K07088 uncharacterized protein no 0.59
18 mRNA_1788 10156 K16368 DGK1 diacylglycerol kinase (CTP) no 0.59
19 mRNA_43 8411 K05609 UCHL3, YUH1 ubiquitin carboxyl-terminal hydrolase L3 no 0.58
20 mRNA_1931 10299 KOG2112 Lysophospholipase no 0.57