Top cofit genes for mRNA_7325 from Rhodosporidium toruloides IFO0880

mRNA_7325 15693 : K01640 E4.1.3.4, HMGCL, hmgL hydroxymethylglutaryl-CoA lyase

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2184 10552 Hypothetical Protein no 0.80
2 mRNA_2076 10444 K15073 UFO1 ubiquitin ligase complex F-box protein UFO1 no 0.73
3 mRNA_5008 13376 KOG2319 Vacuolar assembly/sorting protein VPS9 no 0.72
4 mRNA_3397 11765 K13370 HSD17B8 17beta-estradiol 17-dehydrogenase / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+) no 0.71
5 mRNA_7974 16342 Hypothetical Protein no 0.70
6 mRNA_2552 10920 Hypothetical Protein no 0.70
7 mRNA_6470 14838 Hypothetical Protein no 0.69
8 mRNA_4817 13185 K09966 K09966 uncharacterized protein no 0.69
9 mRNA_3527 11895 K08658 RCE1, FACE2 prenyl protein peptidase no 0.69
10 mRNA_7853 16221 Hypothetical Protein no 0.68
11 mRNA_1272 9640 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.68
12 mRNA_2064 10432 KOG3839 Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans no 0.68
13 mRNA_7626 15994 K00273 DAO, aao D-amino-acid oxidase no 0.68
14 mRNA_4825 13193 Hypothetical Protein no 0.68
15 mRNA_6727 15095 K00761 upp, UPRT uracil phosphoribosyltransferase no 0.67
16 mRNA_2988 11356 KOG1212 Amidases no 0.67
17 mRNA_7707 16075 HMMPfam-PAZ domain-PF02170,HMMPfam-Piwi domain-PF02171,HMMPfam-Domain of unknown function (DUF1785)-PF08699,ProSiteProfiles-PAZ domain profile.-PS50821,ProSiteProfiles-Piwi domain profile.-PS50822,SMART--SM00950,SUPERFAMILY--SSF101690,SUPERFAMILY--SSF53098 no 0.67
18 mRNA_933 9301 HMMPfam-NDT80 / PhoG like DNA-binding family-PF05224,ProSiteProfiles-NDT80 DNA-binding domain profile.-PS51517,SUPERFAMILY--SSF49417 no 0.66
19 mRNA_6443 14811 K10427 DCTN5 dynactin 5 no 0.66
20 mRNA_5140 13508 HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266 no 0.66