Top cofit genes for mRNA_7278 from Rhodosporidium toruloides IFO0880

mRNA_7278 15646 : HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3928 12296 HMMPfam-Fungalysin metallopeptidase (M36)-PF02128,HMMPfam-Fungalysin/Thermolysin Propeptide Motif-PF07504,PRINTS-Fungalysin metallopeptidase (M36) signature-PR00999,SUPERFAMILY--SSF55486 no 0.76
2 mRNA_723 9091 K07127 uraH, pucM, hiuH 5-hydroxyisourate hydrolase no 0.76
3 mRNA_3646 12014 Hypothetical Protein no 0.76
4 mRNA_1995 10363 KOG0062 ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b no 0.72
5 mRNA_248 8616 K01796 E5.1.99.4, AMACR, mcr alpha-methylacyl-CoA racemase no 0.72
6 mRNA_5399 13767 K07078 K07078 uncharacterized protein no 0.71
7 mRNA_2867 11235 HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266 no 0.71
8 mRNA_2619 10987 Hypothetical Protein no 0.71
9 mRNA_3207 11575 Hypothetical Protein no 0.71
10 mRNA_2833 11201 KOG0254 Predicted transporter (major facilitator superfamily) no 0.69
11 mRNA_1497 9865 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.68
12 mRNA_7652 16020 HMMPfam-XPG I-region-PF00867,PRINTS-Xeroderma pigmentosum group G/yeast RAD superfamily signature-PR00853,SMART-Xeroderma pigmentosum G I-region-SM00484,SUPERFAMILY--SSF47807,SUPERFAMILY--SSF88723 no 0.68
13 mRNA_8324 16692 K14026 SEL1, SEL1L SEL1 protein no 0.67
14 mRNA_5243 13611 KOG1601 GATA-4/5/6 transcription factors no 0.67
15 mRNA_112 8480 K10899 RECQL ATP-dependent DNA helicase Q1 no 0.67
16 mRNA_5008 13376 KOG2319 Vacuolar assembly/sorting protein VPS9 no 0.67
17 mRNA_1927 10295 K19691 NIK1, TCSC osomolarity two-component system, sensor histidine kinase NIK1 no 0.65
18 mRNA_2719 11087 Hypothetical Protein no 0.65
19 mRNA_2983 11351 K00993 EPT1 ethanolaminephosphotransferase no 0.65
20 mRNA_2581 10949 K06096 VAPA vesicle-associated membrane protein-associated protein A no 0.65