Top cofit genes for mRNA_7208 from Rhodosporidium toruloides IFO0880

mRNA_7208 15576 : K03361 CDC4 F-box and WD-40 domain protein CDC4

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3777 12145 K20346 TMED4_9_11 p24 family protein alpha no 0.79
2 mRNA_683 9051 K01613 psd, PISD phosphatidylserine decarboxylase no 0.76
3 mRNA_6509 14877 K12494 PSD PH and SEC7 domain-containing protein no 0.75
4 mRNA_7700 16068 HMMPfam-14-3-3 protein-PF00244,PRINTS-14-3-3 protein zeta signature-PR00305,ProSitePatterns-14-3-3 proteins signature 1.-PS00796,SMART-14-3-3 homologues-SM00101,SUPERFAMILY--SSF48445 no 0.74
5 mRNA_7409 15777 HMMPfam-Nucleoporin subcomplex protein binding to Pom34-PF10487 no 0.74
6 mRNA_3034 11402 K05767 IQGAP2_3 Ras GTPase-activating-like protein IQGAP2/3 no 0.73
7 mRNA_864 9232 K11253 H3 histone H3 no 0.73
8 mRNA_5572 13940 K18730 GIGYF PERQ amino acid-rich with GYF domain-containing protein no 0.72
9 mRNA_8463 16831 Hypothetical Protein no 0.69
10 mRNA_6327 14695 K13124 MORG1 mitogen-activated protein kinase organizer 1 no 0.69
11 mRNA_2003 10371 KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif no 0.68
12 mRNA_7780 16148 KOG0376 Serine-threonine phosphatase 2A, catalytic subunit no 0.68
13 mRNA_8276 16644 K06630 YWHAE 14-3-3 protein epsilon no 0.68
14 mRNA_7395 15763 HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786 no 0.68
15 mRNA_4137 12505 BLAST putative protein [Melanopsichium pennsylvanicum 4] no 0.67
16 mRNA_604 8972 K17871 ndh1 NADH-ubiquinone reductase (non-electrogenic) no 0.66
17 mRNA_3905 12273 KOG0118 FOG RRM domain no 0.66
18 mRNA_7916 16284 K08683 HSD17B10 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase no 0.65
19 mRNA_5337 13705 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.65
20 mRNA_6182 14550 K06665 SSN6 glucose repression mediator protein no 0.65