Top cofit genes for mRNA_7178 from Rhodosporidium toruloides IFO0880

mRNA_7178 15546 : KOG0417 Ubiquitin-protein ligase

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5082 13450 K10696 BRE1 E3 ubiquitin-protein ligase BRE1 no 0.87
2 mRNA_1071 9439 K18757 LARP1 la-related protein 1 no 0.87
3 mRNA_7306 15674 KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains no 0.84
4 mRNA_695 9063 Hypothetical Protein no 0.83
5 mRNA_3641 12009 K17615 PPG1 serine/threonine-protein phosphatase PPG1 no 0.82
6 mRNA_5394 13762 SUPERFAMILY--SSF54897 no 0.82
7 mRNA_7489 15857 K12351 SMPD2 sphingomyelin phosphodiesterase 2 no 0.82
8 mRNA_3492 11860 HMMPfam-Cytidine and deoxycytidylate deaminase zinc-binding region-PF00383,SUPERFAMILY--SSF53927 no 0.82
9 mRNA_3741 12109 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.81
10 mRNA_1668 10036 HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729 no 0.81
11 mRNA_1690 10058 BLAST putative transmembrane protein [Rhizoctonia solani 123E] no 0.80
12 mRNA_7990 16358 Hypothetical Protein no 0.79
13 mRNA_5195 13563 KOG0814 Glyoxylase no 0.79
14 mRNA_1218 9586 SUPERFAMILY--SSF52047 no 0.79
15 mRNA_6955 15323 ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616 no 0.79
16 mRNA_5873 14241 K00761 upp, UPRT uracil phosphoribosyltransferase no 0.78
17 mRNA_1740 10108 K20828 ZNF143_76, STAF zinc finger protein 143/76 no 0.78
18 mRNA_665 9033 K08853 AAK AP2-associated kinase no 0.78
19 mRNA_6259 14627 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 no 0.78
20 mRNA_7457 15825 Hypothetical Protein no 0.77