Top cofit genes for mRNA_7164 from Rhodosporidium toruloides IFO0880

mRNA_7164 15532 : K13117 DHX35 ATP-dependent RNA helicase DDX35

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3340 11708 K20523 SH3YL1 SH3 domain-containing YSC84-like protein 1 no 0.72
2 mRNA_7181 15549 BLAST expressed protein [Cryptococcus neoformans var. neofo... no 0.69
3 mRNA_3124 11492 K04079 HSP90A, htpG molecular chaperone HtpG no 0.68
4 mRNA_2902 11270 K20367 ERGIC3, ERV46 endoplasmic reticulum-Golgi intermediate compartment protein 3 no 0.66
5 mRNA_311 8679 KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily no 0.66
6 mRNA_7258 15626 K11378 SAS3 histone acetyltransferase SAS3 no 0.65
7 mRNA_1092 9460 SUPERFAMILY--SSF52833 no 0.65
8 mRNA_5270 13638 Hypothetical Protein no 0.65
9 mRNA_8468 16836 K00131 gapN glyceraldehyde-3-phosphate dehydrogenase (NADP+) no 0.64
10 mRNA_7213 15581 K14636 SLC18A3, VACHT MFS transporter, DHA1 family, solute carrier family 18 (vesicular acetylcholine transporter), member 3 no 0.63
11 mRNA_884 9252 Hypothetical Protein no 0.62
12 mRNA_3703 12071 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.61
13 mRNA_4323 12691 KOG1198 Zinc-binding oxidoreductase no 0.60
14 mRNA_7817 16185 KOG0254 Predicted transporter (major facilitator superfamily) no 0.60
15 mRNA_7262 15630 HMMPfam-Peptidase M50B-like-PF13398 no 0.59
16 mRNA_686 9054 K06867 K06867 uncharacterized protein no 0.59
17 mRNA_1417 9785 K01567 pdaA peptidoglycan-N-acetylmuramic acid deacetylase no 0.58
18 mRNA_2885 11253 K20246 EGT1 L-histidine Nalpha-methyltransferase / hercynylcysteine S-oxide synthase no 0.57
19 mRNA_1941 10309 KOG3798 Predicted Zn-dependent hydrolase (beta-lactamase superfamily) no 0.57
20 mRNA_99 8467 HMMPfam-Fungal cellulose binding domain-PF00734,HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-Coagulation factors 5/8 type C domain (FA58C) profile.-PS50022,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF57180 no 0.57