Top cofit genes for mRNA_6808 from Rhodosporidium toruloides IFO0880

mRNA_6808 15176 : K12856 PRPF8, PRP8 pre-mRNA-processing factor 8

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_8135 16503 K00804 GGPS1 geranylgeranyl diphosphate synthase, type III no 0.80
2 mRNA_4365 12733 HMMPfam-Zinc finger, C3HC4 type (RING finger)-PF13920 no 0.78
3 mRNA_3620 11988 K15777 DOPA 4,5-DOPA dioxygenase extradiol no 0.76
4 mRNA_3284 11652 BLAST something about silencing, SAS, complex subunit 4 [Rh... no 0.76
5 mRNA_1300 9668 BLAST polynucleotide 5-hydroxyl-kinase grc3 [Xanthophyllomy... no 0.76
6 mRNA_2990 11358 SUPERFAMILY--SSF52047 no 0.76
7 mRNA_2247 10615 Hypothetical Protein no 0.76
8 mRNA_2061 10429 HMMPfam-Protein of unknown function (DUF1640)-PF07798 no 0.75
9 mRNA_2818 11186 K02178 BUB1 checkpoint serine/threonine-protein kinase no 0.74
10 mRNA_1558 9926 KOG4155 FOG WD40 repeat no 0.73
11 mRNA_4387 12755 HMMPfam-Ctf8-PF09696 no 0.73
12 mRNA_1630 9998 SUPERFAMILY--SSF81383 no 0.73
13 mRNA_296 8664 K20177 VPS3, TGFBRAP1 vacuolar protein sorting-associated protein 3 no 0.73
14 mRNA_2536 10904 K15601 KDM3 lysine-specific demethylase 3 no 0.73
15 mRNA_5921 14289 K14789 NOP6 nucleolar protein 6 no 0.73
16 mRNA_7701 16069 SMART-Armadillo/beta-catenin-like repeats-SM00185,SUPERFAMILY--SSF48371 no 0.72
17 mRNA_2281 10649 K12190 VPS36, EAP45 ESCRT-II complex subunit VPS36 no 0.72
18 mRNA_698 9066 K12188 SNF8, EAP30 ESCRT-II complex subunit VPS22 no 0.72
19 mRNA_7739 16107 K20476 RIC1 RAB6A-GEF complex partner protein 1 no 0.72
20 mRNA_5442 13810 HMMPfam-R3H domain-PF01424,HMMPfam-SUZ domain-PF12752,ProSiteProfiles-R3H domain profile.-PS51061,ProSiteProfiles-SUZ domain profile.-PS51673,SUPERFAMILY--SSF82708 no 0.72