Top cofit genes for mRNA_6671 from Rhodosporidium toruloides IFO0880

mRNA_6671 15039 : K08331 ATG13 autophagy-related protein 13

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_7147 15515 Hypothetical Protein no 0.79
2 mRNA_6259 14627 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 no 0.79
3 mRNA_2418 10786 HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445 no 0.79
4 mRNA_2804 11172 K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2 no 0.77
5 mRNA_4282 12650 Hypothetical Protein no 0.77
6 mRNA_5456 13824 K07034 K07034 uncharacterized protein no 0.77
7 mRNA_3838 12206 HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961 no 0.76
8 mRNA_963 9331 K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29 no 0.76
9 mRNA_5640 14008 BLAST putative acyl- dehydrogenase [Moniliophthora rore... no 0.75
10 mRNA_8077 16445 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.75
11 mRNA_1529 9897 K12605 CNOT2, NOT2 CCR4-NOT transcription complex subunit 2 no 0.75
12 mRNA_2536 10904 K15601 KDM3 lysine-specific demethylase 3 no 0.75
13 mRNA_1739 10107 Hypothetical Protein no 0.74
14 mRNA_5294 13662 K02830 HRAD1, RAD17 cell cycle checkpoint protein no 0.74
15 mRNA_3374 11742 KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins no 0.74
16 mRNA_3271 11639 K07126 K07126 uncharacterized protein no 0.73
17 mRNA_6257 14625 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.73
18 mRNA_3946 12314 K06176 truD, PUS7 tRNA pseudouridine13 synthase no 0.73
19 mRNA_8041 16409 K13350 PXMP4, PMP24 peroxisomal membrane protein 4 no 0.73
20 mRNA_2343 10711 HMMPfam-GPR1/FUN34/yaaH family-PF01184 no 0.73