Top cofit genes for mRNA_6644 from Rhodosporidium toruloides IFO0880

mRNA_6644 15012 : HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3327 11695 HMMPfam-BAG domain-PF02179,SUPERFAMILY--SSF63491 no 0.87
2 mRNA_990 9358 Hypothetical Protein no 0.85
3 mRNA_1818 10186 Hypothetical Protein no 0.84
4 mRNA_667 9035 Interpro Ribosome associated membrane protein RAMP4 no 0.81
5 mRNA_4192 12560 K04797 pfdA, PFDN5 prefoldin alpha subunit no 0.80
6 mRNA_3946 12314 K06176 truD, PUS7 tRNA pseudouridine13 synthase no 0.80
7 mRNA_6649 15017 K12580 CNOT3, NOT3 CCR4-NOT transcription complex subunit 3 no 0.80
8 mRNA_1237 9605 SUPERFAMILY--SSF52047 no 0.80
9 mRNA_1299 9667 K00600 glyA, SHMT glycine hydroxymethyltransferase no 0.79
10 mRNA_6162 14530 K11427 DOT1L, DOT1 histone-lysine N-methyltransferase, H3 lysine-79 specific no 0.79
11 mRNA_2597 10965 Hypothetical Protein no 0.79
12 mRNA_5509 13877 ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850 no 0.79
13 mRNA_8135 16503 K00804 GGPS1 geranylgeranyl diphosphate synthase, type III no 0.78
14 mRNA_2356 10724 Hypothetical Protein no 0.78
15 mRNA_4570 12938 HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 no 0.78
16 mRNA_4328 12696 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383 no 0.77
17 mRNA_2669 11037 Hypothetical Protein no 0.77
18 mRNA_7912 16280 K11434 PRMT1 type I protein arginine methyltransferase no 0.77
19 mRNA_2744 11112 K20798 HENMT1 small RNA 2'-O-methyltransferase no 0.77
20 mRNA_1546 9914 K18040 PTPN23 tyrosine-protein phosphatase non-receptor type 23 no 0.77