Top cofit genes for mRNA_6572 from Rhodosporidium toruloides IFO0880

mRNA_6572 14940 : HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-Nuclear transport factor 2 (NTF2) domain-PF02136,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Nuclear transport factor 2 domain profile.-PS50177,SMART-WD40 repeats-SM00320,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF50998,SUPERFAMILY--SSF54427,SUPERFAMILY--SSF54928

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_7508 15876 SUPERFAMILY--SSF52047 no 0.74
2 mRNA_6225 14593 Hypothetical Protein no 0.72
3 mRNA_6844 15212 K12183 TSG101, STP22, VPS23 ESCRT-I complex subunit TSG101 no 0.71
4 mRNA_6501 14869 K06902 UMF1 MFS transporter, UMF1 family no 0.69
5 mRNA_4939 13307 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 no 0.66
6 mRNA_3026 11394 Hypothetical Protein no 0.66
7 mRNA_2760 11128 HMMPfam-Acyltransferase-PF01553,SMART-Phosphate acyltransferases-SM00563,SUPERFAMILY--SSF69593 no 0.64
8 mRNA_585 8953 HMMPfam-Polynucleotide kinase 3 phosphatase-PF08645,HMMPfam-AAA domain-PF13671,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF56784 no 0.63
9 mRNA_2541 10909 HMMPfam-Hemerythrin HHE cation binding domain-PF01814 no 0.62
10 mRNA_1482 9850 BLAST zn -c6 transcription factor [Malassezia pachyderm... no 0.62
11 mRNA_1198 9566 Hypothetical Protein no 0.62
12 mRNA_6734 15102 Hypothetical Protein no 0.61
13 mRNA_2923 11291 Hypothetical Protein no 0.61
14 mRNA_439 8807 KOG2246 Galactosyltransferases no 0.60
15 mRNA_8381 16749 Hypothetical Protein no 0.60
16 mRNA_1419 9787 HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729 no 0.60
17 mRNA_6400 14768 K15720 N4BP2 NEDD4-binding protein 2 no 0.59
18 mRNA_148 8516 KOG0254 Predicted transporter (major facilitator superfamily) no 0.59
19 mRNA_5331 13699 SUPERFAMILY--SSF52047 no 0.59
20 mRNA_6422 14790 KOG2084 Predicted histone tail methylase containing SET domain no 0.59