Top cofit genes for mRNA_6558 from Rhodosporidium toruloides IFO0880

mRNA_6558 14926 : HMMPfam-Bacterial signalling protein N terminal repeat-PF03707

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_7004 15372 HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,ProSitePatterns-Glycosyl hydrolases family 5 signature.-PS00659,SUPERFAMILY--SSF51445 no 0.79
2 mRNA_2608 10976 Hypothetical Protein no 0.78
3 mRNA_4198 12566 K00166 BCKDHA, bkdA1 2-oxoisovalerate dehydrogenase E1 component alpha subunit no 0.75
4 mRNA_1814 10182 K00858 ppnK, NADK NAD+ kinase no 0.75
5 mRNA_687 9055 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.75
6 mRNA_6308 14676 K09326 OTX1 homeobox protein OTX1 no 0.74
7 mRNA_918 9286 K10770 ALKBH8 alkylated DNA repair protein alkB homolog 8 no 0.74
8 mRNA_5232 13600 SUPERFAMILY--SSF52047 no 0.73
9 mRNA_7919 16287 K01489 cdd, CDA cytidine deaminase no 0.72
10 mRNA_3924 12292 KOG1993 Nuclear transport receptor KAP120 (importin beta superfamily) no 0.72
11 mRNA_4995 13363 Hypothetical Protein no 0.71
12 mRNA_403 8771 Hypothetical Protein no 0.70
13 mRNA_7670 16038 Hypothetical Protein no 0.69
14 mRNA_402 8770 BLAST N-terminal acetyltransferase catalytic subunit Nat1 [... no 0.69
15 mRNA_7375 15743 HMMPfam-Chromosome segregation protein Csm1/Pcs1-PF12539 no 0.68
16 mRNA_7397 15765 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.68
17 mRNA_5246 13614 K00411 UQCRFS1, RIP1, petA ubiquinol-cytochrome c reductase iron-sulfur subunit no 0.68
18 mRNA_8372 16740 KOG1729 FYVE finger containing protein no 0.67
19 mRNA_2029 10397 K07088 K07088 uncharacterized protein no 0.67
20 mRNA_3796 12164 Hypothetical Protein no 0.66