Top cofit genes for mRNA_6557 from Rhodosporidium toruloides IFO0880

mRNA_6557 14925 : K13566 NIT2 omega-amidase

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_644 9012 KOG3020 TatD-related DNase no 0.68
2 mRNA_6189 14557 ProSiteProfiles-Tyrosine specific protein phosphatases family profile.-PS50056,SUPERFAMILY--SSF52799 no 0.62
3 mRNA_5360 13728 HMMPfam-Xylose isomerase-like TIM barrel-PF01261,SUPERFAMILY--SSF51658 no 0.62
4 mRNA_7975 16343 KOG0762 Mitochondrial carrier protein no 0.62
5 mRNA_7675 16043 Hypothetical Protein no 0.61
6 mRNA_404 8772 HMMPfam-PB1 domain-PF00564,HMMPfam-Zinc finger, ZZ type-PF00569,ProSitePatterns-Zinc finger ZZ-type signature.-PS01357,ProSiteProfiles-Zinc finger ZZ-type profile.-PS50135,SMART-Zinc-binding domain, present in Dystrophin, CREB-binding protein.-SM00291,SUPERFAMILY--SSF54277,SUPERFAMILY--SSF57850 no 0.60
7 mRNA_6913 15281 Hypothetical Protein no 0.60
8 mRNA_769 9137 K08141 MAL MFS transporter, SP family, general alpha glucoside-H+ symporter no 0.60
9 mRNA_5098 13466 K08065 NFYB nuclear transcription Y subunit beta no 0.59
10 mRNA_2950 11318 SUPERFAMILY--SSF56112 no 0.58
11 mRNA_2866 11234 ProSiteProfiles-Myb-like domain profile.-PS50090,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689 no 0.58
12 mRNA_4875 13243 ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112 no 0.58
13 mRNA_8336 16704 KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase no 0.57
14 mRNA_3925 12293 Hypothetical Protein no 0.57
15 mRNA_1939 10307 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) no 0.57
16 mRNA_6809 15177 HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383 no 0.57
17 mRNA_580 8948 Hypothetical Protein no 0.57
18 mRNA_7386 15754 HMMPfam-F-box-like-PF12937 no 0.56
19 mRNA_2742 11110 K18880 HCD1 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase no 0.56
20 mRNA_2848 11216 HMMPfam-GMC oxidoreductase-PF00732,HMMPfam-GMC oxidoreductase-PF05199,PIRSF--PIRSF000137,ProSitePatterns-GMC oxidoreductases signature 2.-PS00624,SUPERFAMILY--SSF51905,SUPERFAMILY--SSF54373 no 0.56