Top cofit genes for mRNA_6548 from Rhodosporidium toruloides IFO0880

mRNA_6548 14916 : K11592 DICER1, DCR1 endoribonuclease Dicer

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_6091 14459 KOG1515 Arylacetamide deacetylase no 0.74
2 mRNA_7617 15985 Hypothetical Protein no 0.71
3 mRNA_5369 13737 K03627 MBF1 putative transcription factor no 0.68
4 mRNA_6281 14649 HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909 no 0.68
5 mRNA_1081 9449 Hypothetical Protein no 0.66
6 mRNA_2705 11073 Hypothetical Protein no 0.66
7 mRNA_6972 15340 K20279 SYNJ synaptojanin no 0.66
8 mRNA_6992 15360 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.66
9 mRNA_4436 12804 Hypothetical Protein no 0.66
10 mRNA_6564 14932 Hypothetical Protein no 0.63
11 mRNA_2289 10657 KOG2454 Betaine aldehyde dehydrogenase no 0.63
12 mRNA_5325 13693 HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF52266 no 0.62
13 mRNA_8390 16758 K00387 SUOX sulfite oxidase no 0.61
14 mRNA_4591 12959 KOG0379 Kelch repeat-containing proteins no 0.61
15 mRNA_8241 16609 Hypothetical Protein no 0.61
16 mRNA_2238 10606 K20813 TDG thymine-DNA glycosylase no 0.61
17 mRNA_1693 10061 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383 no 0.61
18 mRNA_4728 13096 HMMPfam-CUE domain-PF02845,HMMPfam-2OG-Fe(II) oxygenase superfamily-PF13532,ProSiteProfiles-CUE domain profile.-PS51140,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197 no 0.61
19 mRNA_267 8635 K03381 catA catechol 1,2-dioxygenase no 0.61
20 mRNA_6452 14820 Hypothetical Protein no 0.60