Top cofit genes for mRNA_6543 from Rhodosporidium toruloides IFO0880

mRNA_6543 14911 : K08712 ABCG2.SNQ2 ATP-binding cassette, subfamily G (WHITE), member 2, SNQ2

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5083 13451 Hypothetical Protein no 0.82
2 mRNA_6259 14627 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 no 0.80
3 mRNA_3758 12126 HMMPfam-Glycosyl hydrolases family 15-PF00723,SUPERFAMILY--SSF48208 no 0.78
4 mRNA_8464 16832 Hypothetical Protein no 0.76
5 mRNA_3375 11743 Hypothetical Protein no 0.76
6 mRNA_5505 13873 KOG0297 TNF receptor-associated factor no 0.76
7 mRNA_2026 10394 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.75
8 mRNA_1787 10155 HMMPfam-Tctex-1 family-PF03645 no 0.75
9 mRNA_4128 12496 K02926 RP-L4, MRPL4, rplD large subunit ribosomal protein L4 no 0.75
10 mRNA_3963 12331 HMMPfam-Domain of unknown function (DUF4504)-PF14953 no 0.73
11 mRNA_5660 14028 Hypothetical Protein no 0.73
12 mRNA_8376 16744 Hypothetical Protein no 0.72
13 mRNA_8078 16446 HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786 no 0.72
14 mRNA_5801 14169 HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459 no 0.71
15 mRNA_7253 15621 KOG2497 Predicted methyltransferase no 0.71
16 mRNA_5422 13790 HMMPfam-Domain of unknown function (DUF336)-PF03928,SUPERFAMILY--SSF143744 no 0.70
17 mRNA_7489 15857 K12351 SMPD2 sphingomyelin phosphodiesterase 2 no 0.70
18 mRNA_1879 10247 HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 no 0.69
19 mRNA_2639 11007 HMMPfam-Glycosyl hydrolase family 26-PF02156,SUPERFAMILY--SSF51445 no 0.69
20 mRNA_7775 16143 K01673 cynT, can carbonic anhydrase no 0.69