Top cofit genes for mRNA_6380 from Rhodosporidium toruloides IFO0880

mRNA_6380 14748 : HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1379 9747 HMMPfam-Ubiquitin-2 like Rad60 SUMO-like-PF11976,SUPERFAMILY--SSF54236 no 0.85
2 mRNA_7020 15388 K11446 KDM5, JARID1 histone demethylase JARID1 no 0.80
3 mRNA_5623 13991 KOG3393 Predicted membrane protein no 0.77
4 mRNA_4041 12409 HMMPfam-Sds3-like-PF08598 no 0.77
5 mRNA_66 8434 K15118 SLC25A38 solute carrier family 25, member 38 no 0.77
6 mRNA_6311 14679 K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7 no 0.76
7 mRNA_5688 14056 K12199 VTA1, LIP5 vacuolar protein sorting-associated protein VTA1 no 0.76
8 mRNA_4997 13365 HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906 no 0.76
9 mRNA_733 9101 K13954 yiaY alcohol dehydrogenase no 0.75
10 mRNA_3841 12209 K13431 SRPR signal recognition particle receptor subunit alpha no 0.75
11 mRNA_3087 11455 HMMPfam-haloacid dehalogenase-like hydrolase-PF12710,SUPERFAMILY--SSF56784,TIGRFAM-HAD-SF-IB HAD phosphoserine phosphatase-like hydrolase, family IB-TIGR01488,TIGRFAM-DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase-TIGR01489 no 0.74
12 mRNA_7147 15515 Hypothetical Protein no 0.73
13 mRNA_230 8598 K11254 H4 histone H4 no 0.72
14 mRNA_2650 11018 BLAST Plasma membrane fusion protein PRM1 [Grifola frondosa] no 0.72
15 mRNA_4889 13257 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.72
16 mRNA_5294 13662 K02830 HRAD1, RAD17 cell cycle checkpoint protein no 0.71
17 mRNA_3649 12017 HMMPfam-Protein of unknown function, DUF604-PF04646 no 0.71
18 mRNA_3550 11918 Hypothetical Protein no 0.71
19 mRNA_4877 13245 KOG2533 Permease of the major facilitator superfamily no 0.71
20 mRNA_5258 13626 KOG0538 Glycolate oxidase no 0.71