Top cofit genes for mRNA_6376 from Rhodosporidium toruloides IFO0880

mRNA_6376 14744 : K14811 DBP3 ATP-dependent RNA helicase DBP3

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3841 12209 K13431 SRPR signal recognition particle receptor subunit alpha no 0.87
2 mRNA_3423 11791 KOG3655 Drebrins and related actin binding proteins no 0.86
3 mRNA_2192 10560 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.85
4 mRNA_1546 9914 K18040 PTPN23 tyrosine-protein phosphatase non-receptor type 23 no 0.83
5 mRNA_2818 11186 K02178 BUB1 checkpoint serine/threonine-protein kinase no 0.82
6 mRNA_8135 16503 K00804 GGPS1 geranylgeranyl diphosphate synthase, type III no 0.81
7 mRNA_2569 10937 K07250 gabT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase no 0.80
8 mRNA_4877 13245 KOG2533 Permease of the major facilitator superfamily no 0.79
9 mRNA_3284 11652 BLAST something about silencing, SAS, complex subunit 4 [Rh... no 0.79
10 mRNA_1299 9667 K00600 glyA, SHMT glycine hydroxymethyltransferase no 0.78
11 mRNA_1494 9862 HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784 no 0.78
12 mRNA_7433 15801 K10356 MYO1 myosin I no 0.77
13 mRNA_6311 14679 K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7 no 0.77
14 mRNA_5309 13677 KOG0628 Aromatic-L-amino-acid/L-histidine decarboxylase no 0.77
15 mRNA_2650 11018 BLAST Plasma membrane fusion protein PRM1 [Grifola frondosa] no 0.77
16 mRNA_1895 10263 K09247 CYP1, HAP1 heme activator protein 1 no 0.77
17 mRNA_7020 15388 K11446 KDM5, JARID1 histone demethylase JARID1 no 0.76
18 mRNA_5878 14246 KOG4210 Nuclear localization sequence binding protein no 0.76
19 mRNA_68 8436 K12599 SKI2, SKIV2L antiviral helicase SKI2 no 0.76
20 mRNA_3040 11408 K17275 PLS1 plastin-1 no 0.76