Top cofit genes for mRNA_6259 from Rhodosporidium toruloides IFO0880

mRNA_6259 14627 : HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_8077 16445 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.85
2 mRNA_4282 12650 Hypothetical Protein no 0.83
3 mRNA_1245 9613 HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481 no 0.82
4 mRNA_6728 15096 K14309 NUP93, NIC96 nuclear pore complex protein Nup93 no 0.82
5 mRNA_3271 11639 K07126 K07126 uncharacterized protein no 0.82
6 mRNA_2804 11172 K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2 no 0.81
7 mRNA_3688 12056 KOG4285 Mitotic phosphoprotein no 0.80
8 mRNA_3375 11743 Hypothetical Protein no 0.80
9 mRNA_6543 14911 K08712 ABCG2.SNQ2 ATP-binding cassette, subfamily G (WHITE), member 2, SNQ2 no 0.80
10 mRNA_128 8496 K11592 DICER1, DCR1 endoribonuclease Dicer no 0.79
11 mRNA_6671 15039 K08331 ATG13 autophagy-related protein 13 no 0.79
12 mRNA_2536 10904 K15601 KDM3 lysine-specific demethylase 3 no 0.78
13 mRNA_7178 15546 KOG0417 Ubiquitin-protein ligase no 0.78
14 mRNA_6257 14625 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.78
15 mRNA_308 8676 K07952 ARFRP1 ADP-ribosylation factor related protein 1 no 0.77
16 mRNA_5640 14008 BLAST putative acyl- dehydrogenase [Moniliophthora rore... no 0.77
17 mRNA_1739 10107 Hypothetical Protein no 0.77
18 mRNA_3758 12126 HMMPfam-Glycosyl hydrolases family 15-PF00723,SUPERFAMILY--SSF48208 no 0.76
19 mRNA_8464 16832 Hypothetical Protein no 0.76
20 mRNA_6455 14823 KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins no 0.75