Top cofit genes for mRNA_6049 from Rhodosporidium toruloides IFO0880

mRNA_6049 14417 : K08517 SEC22 vesicle transport protein SEC22

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_142 8510 HMMPfam-Protein of unknown function (DUF3712)-PF12505 no 0.85
2 mRNA_6267 14635 KOG1721 FOG Zn-finger no 0.80
3 mRNA_209 8577 K12571 PAN2 PAB-dependent poly(A)-specific ribonuclease subunit 2 no 0.79
4 mRNA_604 8972 K17871 ndh1 NADH-ubiquinone reductase (non-electrogenic) no 0.79
5 mRNA_4381 12749 BLAST glycosyltransferase family 25 [Puccinia cf. psidii AE... no 0.76
6 mRNA_8230 16598 K09668 LARGE glycosyltransferase-like protein LARGE no 0.75
7 mRNA_2796 11164 K08286 E2.7.11.- protein-serine/threonine kinase no 0.74
8 mRNA_811 9179 Interpro Glycosyl-transferase for dystroglycan no 0.74
9 mRNA_8232 16600 K12623 LSM4 U6 snRNA-associated Sm-like protein LSm4 no 0.73
10 mRNA_1000 9368 BLAST glycosyltransferase 2 [Moniliophthora roreri MCA ... no 0.71
11 mRNA_33 8401 HMMPfam-Myosin-binding striated muscle assembly central-PF11701,SUPERFAMILY--SSF48371 no 0.70
12 mRNA_505 8873 HMMPfam-ubiE/COQ5 methyltransferase family-PF01209,SUPERFAMILY--SSF53335 no 0.70
13 mRNA_6591 14959 K05724 FGD5_6 FYVE, RhoGEF and PH domain containing 5/6 no 0.70
14 mRNA_6807 15175 HMMPfam-GRIP domain-PF01465,ProSiteProfiles-GRIP domain profile.-PS50913,SMART-golgin-97, RanBP2alpha,Imh1p and p230/golgin-245-SM00755 no 0.70
15 mRNA_7030 15398 SUPERFAMILY--SSF50685 no 0.70
16 mRNA_2346 10714 BLAST putative protein [Melanopsichium pennsylvanicum 4] no 0.69
17 mRNA_743 9111 K08493 VTI1 vesicle transport through interaction with t-SNAREs 1 no 0.69
18 mRNA_7072 15440 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.68
19 mRNA_8226 16594 KOG0849 Transcription factor PRD and related proteins, contain PAX and HOX domains no 0.67
20 mRNA_5148 13516 K17918 SNX3_12 sorting nexin-3/12 no 0.67