Top cofit genes for mRNA_6017 from Rhodosporidium toruloides IFO0880

mRNA_6017 14385 : Hypothetical Protein

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1441 9809 K17871 ndh1 NADH-ubiquinone reductase (non-electrogenic) no 0.68
2 mRNA_2938 11306 Hypothetical Protein no 0.65
3 mRNA_6633 15001 KOG1114 Tripeptidyl peptidase II no 0.65
4 mRNA_8438 16806 K07910 RAB18 Ras-related protein Rab-18 no 0.62
5 mRNA_1897 10265 K07443 ybaZ methylated-DNA-protein-cysteine methyltransferase related protein no 0.61
6 mRNA_1641 10009 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.60
7 mRNA_5178 13546 BLAST chromatin remodeling factor subunit [Kalmanozyma ... no 0.60
8 mRNA_19 8387 KOG1399 Flavin-containing monooxygenase no 0.59
9 mRNA_585 8953 HMMPfam-Polynucleotide kinase 3 phosphatase-PF08645,HMMPfam-AAA domain-PF13671,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF56784 no 0.58
10 mRNA_357 8725 K01556 KYNU, kynU kynureninase no 0.58
11 mRNA_2631 10999 K14803 PTC2_3 protein phosphatase PTC2/3 no 0.58
12 mRNA_5946 14314 Hypothetical Protein no 0.58
13 mRNA_5809 14177 KOG2979 Protein involved in DNA repair no 0.58
14 mRNA_6497 14865 HMMPfam-Peptidase family M28-PF04389,SUPERFAMILY--SSF53187 no 0.58
15 mRNA_3336 11704 K07827 KRAS, KRAS2 GTPase KRas no 0.57
16 mRNA_8265 16633 KOG0444 Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) no 0.57
17 mRNA_8432 16800 Hypothetical Protein no 0.57
18 mRNA_3077 11445 K07542 PIGV phosphatidylinositol glycan, class V no 0.57
19 mRNA_2961 11329 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.56
20 mRNA_367 8735 ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452 no 0.56