Top cofit genes for mRNA_5939 from Rhodosporidium toruloides IFO0880

mRNA_5939 14307 : BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ...

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5756 14124 HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689 no 0.69
2 mRNA_6945 15313 SUPERFAMILY--SSF52047 no 0.68
3 mRNA_5843 14211 HMMPfam-Tim10/DDP family zinc finger-PF02953 no 0.66
4 mRNA_1936 10304 K07424 CYP3A cytochrome P450, family 3, subfamily A no 0.64
5 mRNA_786 9154 Hypothetical Protein no 0.64
6 mRNA_2194 10562 BLAST ER to Golgi transport-related protein, putative [Cryp... no 0.63
7 mRNA_1264 9632 HMMPfam-Mitochondrial ribosomal protein subunit L20-PF12824 no 0.62
8 mRNA_5442 13810 HMMPfam-R3H domain-PF01424,HMMPfam-SUZ domain-PF12752,ProSiteProfiles-R3H domain profile.-PS51061,ProSiteProfiles-SUZ domain profile.-PS51673,SUPERFAMILY--SSF82708 no 0.61
9 mRNA_611 8979 K00490 CYP4F cytochrome P450, family 4, subfamily F no 0.60
10 mRNA_1186 9554 K20410 MAPKAP1, SIN1 target of rapamycin complex 2 subunit MAPKAP1 no 0.60
11 mRNA_7468 15836 Hypothetical Protein no 0.60
12 mRNA_4889 13257 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.60
13 mRNA_2681 11049 Hypothetical Protein no 0.60
14 mRNA_2873 11241 HMMPfam-Yeast cortical protein KAR9-PF08580,ProSiteProfiles-GAR domain profile.-PS51460,SUPERFAMILY--SSF143575 no 0.60
15 mRNA_1702 10070 Hypothetical Protein no 0.59
16 mRNA_2459 10827 KOG2747 Histone acetyltransferase (MYST family) no 0.59
17 mRNA_3900 12268 SUPERFAMILY--SSF55729 no 0.58
18 mRNA_6934 15302 K12871 CCDC12 coiled-coil domain-containing protein 12 no 0.58
19 mRNA_2818 11186 K02178 BUB1 checkpoint serine/threonine-protein kinase no 0.58
20 mRNA_5916 14284 Hypothetical Protein no 0.58