Top cofit genes for mRNA_5756 from Rhodosporidium toruloides IFO0880

mRNA_5756 14124 : HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5843 14211 HMMPfam-Tim10/DDP family zinc finger-PF02953 no 0.87
2 mRNA_5921 14289 K14789 NOP6 nucleolar protein 6 no 0.82
3 mRNA_3284 11652 BLAST something about silencing, SAS, complex subunit 4 [Rh... no 0.81
4 mRNA_68 8436 K12599 SKI2, SKIV2L antiviral helicase SKI2 no 0.81
5 mRNA_6945 15313 SUPERFAMILY--SSF52047 no 0.80
6 mRNA_7912 16280 K11434 PRMT1 type I protein arginine methyltransferase no 0.79
7 mRNA_2361 10729 Hypothetical Protein no 0.79
8 mRNA_3271 11639 K07126 K07126 uncharacterized protein no 0.79
9 mRNA_786 9154 Hypothetical Protein no 0.79
10 mRNA_3128 11496 BLAST protein transporter [Pseudozyma hubeiensis SY62] no 0.78
11 mRNA_6257 14625 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.78
12 mRNA_2459 10827 KOG2747 Histone acetyltransferase (MYST family) no 0.77
13 mRNA_208 8576 K19270 yfbT, yniC sugar-phosphatase no 0.77
14 mRNA_2960 11328 KOG2617 Citrate synthase no 0.76
15 mRNA_4422 12790 BLAST Regulator of nonsense transcripts UPF2 [Grifola frond... no 0.75
16 mRNA_3900 12268 SUPERFAMILY--SSF55729 no 0.75
17 mRNA_2418 10786 HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445 no 0.75
18 mRNA_4498 12866 Hypothetical Protein no 0.75
19 mRNA_1721 10089 K11483 HOS2 histone deacetylase HOS2 no 0.75
20 mRNA_4871 13239 K03777 dld D-lactate dehydrogenase no 0.75