Top cofit genes for mRNA_5549 from Rhodosporidium toruloides IFO0880

mRNA_5549 13917 : K00027 ME2, sfcA, maeA malate dehydrogenase (oxaloacetate-decarboxylating)

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3497 11865 HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236 no 0.85
2 mRNA_1454 9822 K11390 CLYBL citrate lyase subunit beta-like protein no 0.84
3 mRNA_5805 14173 HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324 no 0.78
4 mRNA_4670 13038 Hypothetical Protein no 0.78
5 mRNA_1482 9850 BLAST zn -c6 transcription factor [Malassezia pachyderm... no 0.78
6 mRNA_753 9121 K02737 PSMB5 20S proteasome subunit beta 5 no 0.77
7 mRNA_5664 14032 K01262 pepP Xaa-Pro aminopeptidase no 0.76
8 mRNA_3627 11995 SUPERFAMILY--SSF51110,SUPERFAMILY--SSF51126 no 0.76
9 mRNA_316 8684 K18802 DUG3 glutamine amidotransferase no 0.75
10 mRNA_7422 15790 Hypothetical Protein no 0.75
11 mRNA_5019 13387 HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 no 0.75
12 mRNA_5589 13957 HMMPfam-Region in Clathrin and VPS-PF00637,ProSiteProfiles-Clathrin heavy-chain (CHCR) repeat profile.-PS50236,SMART-Clathrin heavy chain repeat homology-SM00299,SUPERFAMILY--SSF48371 no 0.74
13 mRNA_331 8699 K03940 NDUFS7 NADH dehydrogenase (ubiquinone) Fe-S protein 7 no 0.74
14 mRNA_3305 11673 KOG3299 Uncharacterized conserved protein no 0.73
15 mRNA_6305 14673 HMMPfam-FAM72 protein-PF14976,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028 no 0.73
16 mRNA_7827 16195 KOG4680 Uncharacterized conserved protein, contains ML domain no 0.73
17 mRNA_6359 14727 KOG1812 Predicted E3 ubiquitin ligase no 0.73
18 mRNA_6281 14649 HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909 no 0.73
19 mRNA_1170 9538 K09531 DNAJC11 DnaJ homolog subfamily C member 11 no 0.73
20 mRNA_512 8880 HMMPfam-Glutathione S-transferase, C-terminal domain-PF13410,HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF47616,SUPERFAMILY--SSF52833 no 0.72