Top cofit genes for mRNA_5505 from Rhodosporidium toruloides IFO0880

mRNA_5505 13873 : KOG0297 TNF receptor-associated factor

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3758 12126 HMMPfam-Glycosyl hydrolases family 15-PF00723,SUPERFAMILY--SSF48208 no 0.78
2 mRNA_6543 14911 K08712 ABCG2.SNQ2 ATP-binding cassette, subfamily G (WHITE), member 2, SNQ2 no 0.76
3 mRNA_5422 13790 HMMPfam-Domain of unknown function (DUF336)-PF03928,SUPERFAMILY--SSF143744 no 0.74
4 mRNA_6259 14627 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 no 0.73
5 mRNA_5337 13705 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.73
6 mRNA_6671 15039 K08331 ATG13 autophagy-related protein 13 no 0.72
7 mRNA_4085 12453 Hypothetical Protein no 0.71
8 mRNA_5770 14138 K15171 SUPT4H1, SPT4 transcription elongation factor SPT4 no 0.71
9 mRNA_6182 14550 K06665 SSN6 glucose repression mediator protein no 0.70
10 mRNA_6327 14695 K13124 MORG1 mitogen-activated protein kinase organizer 1 no 0.69
11 mRNA_2440 10808 Hypothetical Protein no 0.69
12 mRNA_8480 16848 KOG2174 Leptin receptor gene-related protein no 0.68
13 mRNA_6230 14598 K10688 UBE2W, UBC16 ubiquitin-conjugating enzyme E2 W no 0.68
14 mRNA_6504 14872 Hypothetical Protein no 0.67
15 mRNA_2804 11172 K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2 no 0.67
16 mRNA_4282 12650 Hypothetical Protein no 0.67
17 mRNA_5171 13539 KOG2262 Sexual differentiation process protein ISP4 no 0.66
18 mRNA_8464 16832 Hypothetical Protein no 0.66
19 mRNA_2719 11087 Hypothetical Protein no 0.66
20 mRNA_5689 14057 KOG4206 Spliceosomal protein snRNP-U1A/U2B no 0.66