Top cofit genes for mRNA_5384 from Rhodosporidium toruloides IFO0880

mRNA_5384 13752 : HMMPfam-RNase H-PF00075,ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_4061 12429 SUPERFAMILY--SSF52540 no 0.77
2 mRNA_3105 11473 KOG1515 Arylacetamide deacetylase no 0.73
3 mRNA_7737 16105 HMMPfam-Antibiotic biosynthesis monooxygenase-PF03992,SUPERFAMILY--SSF54909 no 0.73
4 mRNA_4935 13303 BLAST salivary gland secretion 1 [Moniliophthora roreri... no 0.72
5 mRNA_7341 15709 KOG4062 6-O-methylguanine-DNA methyltransferase MGMT/MGT1, involved in DNA repair no 0.72
6 mRNA_4770 13138 KOG0988 RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference no 0.71
7 mRNA_4512 12880 KOG1152 Signal transduction serine/threonine kinase with PAS/PAC sensor domain no 0.70
8 mRNA_7901 16269 KOG1605 TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) no 0.69
9 mRNA_2179 10547 K06681 LTE1 Gdp/GTP exchange factor required for growth at low temperatures no 0.69
10 mRNA_1103 9471 KOG0252 Inorganic phosphate transporter no 0.69
11 mRNA_2944 11312 BLAST Putative CigA protein [Rhizopus microsporus] no 0.68
12 mRNA_7695 16063 HMMPfam-Domain of unknown function (DUF1992)-PF09350 no 0.68
13 mRNA_7277 15645 HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899 no 0.67
14 mRNA_8339 16707 K06180 rluD 23S rRNA pseudouridine1911/1915/1917 synthase no 0.67
15 mRNA_2403 10771 HMMPfam-Protein of unknown function (DUF2462)-PF09495 no 0.67
16 mRNA_1144 9512 K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial no 0.67
17 mRNA_7537 15905 K13524 ABAT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase no 0.66
18 mRNA_389 8757 HMMPfam-Vacuolar sorting protein 9 (VPS9) domain-PF02204,ProSiteProfiles-VPS9 domain profile.-PS51205,SUPERFAMILY--SSF109993 no 0.65
19 mRNA_8157 16525 ProSiteProfiles-DOMON domain profile.-PS50836,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665,SUPERFAMILY--SSF49344 no 0.65
20 mRNA_2064 10432 KOG3839 Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans no 0.64