Top cofit genes for mRNA_5337 from Rhodosporidium toruloides IFO0880

mRNA_5337 13705 : HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3034 11402 K05767 IQGAP2_3 Ras GTPase-activating-like protein IQGAP2/3 no 0.81
2 mRNA_577 8945 Hypothetical Protein no 0.76
3 mRNA_8463 16831 Hypothetical Protein no 0.73
4 mRNA_5505 13873 KOG0297 TNF receptor-associated factor no 0.73
5 mRNA_3758 12126 HMMPfam-Glycosyl hydrolases family 15-PF00723,SUPERFAMILY--SSF48208 no 0.73
6 mRNA_2538 10906 SUPERFAMILY--SSF56112 no 0.72
7 mRNA_2488 10856 KOG1804 RNA helicase no 0.72
8 mRNA_8078 16446 HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786 no 0.71
9 mRNA_221 8589 HMMPfam-Squalene/phytoene synthase-PF00494,ProSitePatterns-Squalene and phytoene synthases signature 2.-PS01045,SUPERFAMILY--SSF48576,TIGRFAM-CarR_dom_SF lycopene cyclase domain-TIGR03462 no 0.70
10 mRNA_3777 12145 K20346 TMED4_9_11 p24 family protein alpha no 0.69
11 mRNA_6327 14695 K13124 MORG1 mitogen-activated protein kinase organizer 1 no 0.67
12 mRNA_6955 15323 ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616 no 0.66
13 mRNA_3012 11380 K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit no 0.66
14 mRNA_7204 15572 HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383 no 0.66
15 mRNA_2204 10572 K03786 aroQ, qutE 3-dehydroquinate dehydratase II no 0.65
16 mRNA_934 9302 K18726 FAF2, UBXD8 FAS-associated factor 2 no 0.65
17 mRNA_7208 15576 K03361 CDC4 F-box and WD-40 domain protein CDC4 no 0.65
18 mRNA_4 8372 K00772 mtaP, MTAP 5'-methylthioadenosine phosphorylase no 0.65
19 mRNA_3439 11807 KOG1703 Adaptor protein Enigma and related PDZ-LIM proteins no 0.65
20 mRNA_3528 11896 Hypothetical Protein no 0.65