Top cofit genes for mRNA_5299 from Rhodosporidium toruloides IFO0880

mRNA_5299 13667 : BLAST RNA polymerase sigma factor, sigma-70 family [Rho...

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5678 14046 K06005 SAP candidapepsin no 0.74
2 mRNA_2744 11112 K20798 HENMT1 small RNA 2'-O-methyltransferase no 0.72
3 mRNA_4913 13281 HMMPfam-Spermine/spermidine synthase-PF01564,ProSiteProfiles-Polyamine biosynthesis (PABS) domain profile.-PS51006,SUPERFAMILY--SSF53335 no 0.70
4 mRNA_3644 12012 Hypothetical Protein no 0.67
5 mRNA_7966 16334 HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 no 0.66
6 mRNA_4410 12778 K00877 THI20 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase / thiaminase no 0.66
7 mRNA_394 8762 KOG0714 Molecular chaperone (DnaJ superfamily) no 0.66
8 mRNA_3093 11461 Hypothetical Protein no 0.65
9 mRNA_6212 14580 SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045 no 0.65
10 mRNA_6467 14835 K20242 EVI5 ecotropic viral integration site 5 protein no 0.65
11 mRNA_944 9312 Hypothetical Protein no 0.64
12 mRNA_2745 11113 HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785 no 0.63
13 mRNA_229 8597 Hypothetical Protein no 0.62
14 mRNA_4717 13085 BLAST putative proteasome regulatory subunit 12 [Rhizoctoni... no 0.62
15 mRNA_2896 11264 KOG3043 Predicted hydrolase related to dienelactone hydrolase no 0.62
16 mRNA_4489 12857 KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.61
17 mRNA_2107 10475 K01918 panC pantoate--beta-alanine ligase no 0.61
18 mRNA_5156 13524 K00108 betA, CHDH choline dehydrogenase no 0.61
19 mRNA_6590 14958 K03009 RPB12, POLR2K DNA-directed RNA polymerases I, II, and III subunit RPABC4 no 0.60
20 mRNA_1695 10063 BLAST cyclin-like F-box domain containing protein [Rhod... no 0.60