Top cofit genes for mRNA_4940 from Rhodosporidium toruloides IFO0880

mRNA_4940 13308 : K06693 PSMD9 26S proteasome non-ATPase regulatory subunit 9

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_4566 12934 KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins no 0.77
2 mRNA_3252 11620 KOG3348 BolA (bacterial stress-induced morphogen)-related protein no 0.76
3 mRNA_6514 14882 KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter no 0.69
4 mRNA_3305 11673 KOG3299 Uncharacterized conserved protein no 0.68
5 mRNA_8346 16714 Hypothetical Protein no 0.68
6 mRNA_5616 13984 HMMPfam-GRF zinc finger-PF06839 no 0.68
7 mRNA_176 8544 HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474 no 0.68
8 mRNA_8357 16725 K01739 metB cystathionine gamma-synthase no 0.67
9 mRNA_6775 15143 K14784 CMS1 protein CMS1 no 0.65
10 mRNA_3140 11508 BLAST peptide release factor [Melanopsichium pennsylvanicum 4] no 0.65
11 mRNA_7244 15612 HMMPfam-PQ loop repeat-PF04193,SMART-Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.-SM00679 no 0.65
12 mRNA_6346 14714 HMMPfam-Protein of unknown function (DUF938)-PF06080,SUPERFAMILY--SSF53335 no 0.65
13 mRNA_64 8432 HMMPfam-Transcription initiation factor TFIID component TAF4 family-PF05236 no 0.64
14 mRNA_5789 14157 KOG2859 DNA repair protein, member of the recA/RAD51 family no 0.64
15 mRNA_7444 15812 Hypothetical Protein no 0.64
16 mRNA_8267 16635 K01897 ACSL, fadD long-chain acyl-CoA synthetase no 0.64
17 mRNA_5042 13410 K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2 no 0.64
18 mRNA_6239 14607 K01372 BLMH, pepC bleomycin hydrolase no 0.63
19 mRNA_5460 13828 Hypothetical Protein no 0.63
20 mRNA_5836 14204 Hypothetical Protein no 0.62