Top cofit genes for mRNA_4909 from Rhodosporidium toruloides IFO0880

mRNA_4909 13277 : KOG1339 Aspartyl protease

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_7182 15550 HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978 no 0.78
2 mRNA_1569 9937 KOG3114 Uncharacterized conserved protein no 0.75
3 mRNA_1214 9582 Hypothetical Protein no 0.72
4 mRNA_8087 16455 ProSiteProfiles-BRCT domain profile.-PS50172,SUPERFAMILY--SSF52113 no 0.71
5 mRNA_1356 9724 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.71
6 mRNA_5421 13789 Interpro Domain of unknown function (DUF5102) 0 no 0.70
7 mRNA_1426 9794 Hypothetical Protein no 0.70
8 mRNA_3624 11992 SUPERFAMILY--SSF52047 no 0.69
9 mRNA_7923 16291 Hypothetical Protein no 0.68
10 mRNA_407 8775 Hypothetical Protein no 0.68
11 mRNA_4965 13333 K15156 MED14, RGR1 mediator of RNA polymerase II transcription subunit 14 no 0.67
12 mRNA_6447 14815 Hypothetical Protein no 0.66
13 mRNA_3848 12216 KOG1817 Ribonuclease no 0.66
14 mRNA_435 8803 K14845 RAI1, DOM3Z RAT1-interacting protein no 0.66
15 mRNA_3364 11732 K15423 PPP4C serine/threonine-protein phosphatase 4 catalytic subunit no 0.66
16 mRNA_6142 14510 Hypothetical Protein no 0.66
17 mRNA_8321 16689 Hypothetical Protein no 0.65
18 mRNA_7628 15996 KOG1721 FOG Zn-finger no 0.65
19 mRNA_4065 12433 KOG1198 Zinc-binding oxidoreductase no 0.65
20 mRNA_2747 11115 Hypothetical Protein no 0.65